Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase from Klebsiella michiganensis M5al

 Score =  131 bits (329), Expect = 2e-35
 Identities = 96/314 (30%), Positives = 153/314 (48%), Gaps = 24/314 (7%)

Query: 13  IDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNK-KRVKAEYKLEAGDVVRVPPV 71
           + E+  GQR+D  L     +  +S +   +    V VN     K + K+  G+ + +   
Sbjct: 11  VSENQLGQRLDQALAELFPDYSRSRIKEWILDQRVLVNGCVSDKPKEKVLGGETIAID-- 68

Query: 72  TVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAI-EALR 130
            VE++E     P        ++   IVYEDD +L++NKP    VH G+G   G +  AL 
Sbjct: 69  -VEIEEEVRFQPQ-------DIPLNIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALL 120

Query: 131 ALRPQARFLE---LVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGHWD 187
              P    +    +VHR+D+DT+G+++VAK   A   L    + + + + Y A+ +GH  
Sbjct: 121 HYYPAIADVPRAGIVHRLDKDTTGLMVVAKTIPAQTRLVESLQLREITREYEAVAIGHMT 180

Query: 188 AECKVVNAPLLKNEVNSI-VRVNPNGKPSETRFRILEKFAEATLVQASPVTGRTHQIRVH 246
           A    V  P+ ++      + V+P GKP+ T +RI+E F   T ++    TGRTHQIRVH
Sbjct: 181 AG-GTVEEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRIHTRLRLRLETGRTHQIRVH 239

Query: 247 TQYMGHPIAWDDRYGDR-------RFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHA 299
             ++ HP+  D  YG R         +  TA    +R  LHA  ++  HP S  ++E HA
Sbjct: 240 MAHITHPLVGDQVYGGRPRPPKGASEEFITALRKFDRQALHATMLRLYHPISGIEMEWHA 299

Query: 300 PLEAHLEQALTKMR 313
           P+   +   +  MR
Sbjct: 300 PIPQDMVDLIDAMR 313