Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase from Klebsiella michiganensis M5al

 Score =  405 bits (1042), Expect = e-118
 Identities = 208/311 (66%), Positives = 240/311 (77%), Gaps = 5/311 (1%)

Query: 8   VQFIDIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDVVR 67
           V+ + I +D AGQRIDNFLR QLK +PKS++YRILRKGEVRVNKKRVK EYKLEAGD VR
Sbjct: 22  VKMVAIADDEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRVKPEYKLEAGDEVR 81

Query: 68  VPPVTVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAIE 127
           +PPV V  KE E   P   L KVA L   I+YEDDH+L+LNKPSGTAVHGGSGL FG IE
Sbjct: 82  IPPVRVSEKEEEAVSPH--LQKVAALADVILYEDDHILVLNKPSGTAVHGGSGLSFGVIE 139

Query: 128 ALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGHWD 187
            LRALRP+ARFLELVHR+DRDTSG+LLVAKKRSALR L  Q R+K +QK Y ALV G W 
Sbjct: 140 GLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLRDKGMQKDYLALVRGQWQ 199

Query: 188 AECKVVNAPLLKNEVNS---IVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRTHQIR 244
           +  KVV APLLKN + S   IVRVN  GKPSETRF++ E+F  ATLV+ SPVTGRTHQIR
Sbjct: 200 SHTKVVQAPLLKNILQSGERIVRVNQEGKPSETRFKVEERFTHATLVRCSPVTGRTHQIR 259

Query: 245 VHTQYMGHPIAWDDRYGDRRFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHAPLEAH 304
           VHTQY GHPIA+DDRYGDR FD   A  G+ RLFLHAA ++F HP S + + + APL+  
Sbjct: 260 VHTQYAGHPIAFDDRYGDREFDKQLAGTGLNRLFLHAAALKFTHPGSGEIMRVEAPLDNQ 319

Query: 305 LEQALTKMRQA 315
           L++ L  +R A
Sbjct: 320 LKRCLQVLRSA 330