Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., ribosomal large subunit pseudouridine synthase C from Caulobacter crescentus NA1000

 Score =  125 bits (314), Expect = 1e-33
 Identities = 83/242 (34%), Positives = 130/242 (53%), Gaps = 12/242 (4%)

Query: 67  RVPPVTVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAI 126
           R PP   + K +E  P +    ++A  +  ++YED+ +++LNKP+G +  GG        
Sbjct: 7   RRPPAQAKPKASE-TPIALTPDEIAAAQSWVLYEDETIIVLNKPAGLSSQGGRIKAHTLD 65

Query: 127 EALRAL-RPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGH 185
           + L A  RP     +LVHR+DRDTSG++L AK + A   L      K  +K Y A+V G 
Sbjct: 66  DLLWAFARPNRPRPKLVHRLDRDTSGVILTAKTKPAAAMLGKALEAKRFRKSYLAIVAGA 125

Query: 186 WDAECKVVNAPLLKNEVN--SIVRV----NPNGKPSETRFRILEKFAEATLVQASPVTGR 239
            + +  ++++PL +  +   + +RV    +P+ + + +R+R L     A LV+ SP TGR
Sbjct: 126 PEPKGGMIDSPLRRESIGREAYMRVCEPDHPDAETARSRYRTLAHNGLAALVELSPDTGR 185

Query: 240 THQIRVHTQYMGHPIAWDDRYGDRRFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHA 299
            HQ+RVH   +G P+A D RYG              RL LHAA++ F HP   ++ +I A
Sbjct: 186 MHQLRVHMASIGRPLAGDSRYGGA---LMLGGVPAPRLMLHAASLAFPHPLGGER-KILA 241

Query: 300 PL 301
           PL
Sbjct: 242 PL 243