Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., ribosomal large subunit pseudouridine synthase C from Burkholderia phytofirmans PsJN

 Score =  279 bits (713), Expect = 8e-80
 Identities = 150/318 (47%), Positives = 208/318 (65%), Gaps = 15/318 (4%)

Query: 7   QVQFIDIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDVV 66
           QV  I+ID+  AGQRIDNFL    K +PKS +YRILR GEVRVNK R+ A+Y+LE GD+V
Sbjct: 16  QVSMIEIDDSAAGQRIDNFLLRVCKGVPKSHIYRILRSGEVRVNKGRIDAQYRLELGDLV 75

Query: 67  RVPPVTVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAI 126
           RVPP+ V     +P+  +T+ + V      I++ED+HLL+++KP+G AVHGGSG+ FG I
Sbjct: 76  RVPPIRVA----QPSETATQ-APVPAAHFKIIFEDEHLLVIDKPAGVAVHGGSGVAFGVI 130

Query: 127 EALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGHW 186
           E +R  RPQA+FLELVHR+DR+TSGIL++AKKRSAL +L  Q RE  + K YYA V G W
Sbjct: 131 EQMREARPQAKFLELVHRLDRETSGILMLAKKRSALVNLHEQIRENKMDKRYYACVHGDW 190

Query: 187 DAEC---KVVNAPL---LKNEVNSIVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRT 240
            ++    + V  PL   L  +    VRV P+G  S T F +++++ E  L++A   TGRT
Sbjct: 191 ASDWGRRRAVKEPLHKYLTADGERRVRVQPDGLASHTVFNLIDRWPEYALLEAELKTGRT 250

Query: 241 HQIRVHTQYMGHPIAWDDRYGD----RRFDAYTAQFGIERLFLHAANIQFVHPASEKKLE 296
           HQIRVH Q++  PI  D +YGD    +      A+ G++R+FLHA  ++  HPA+   L+
Sbjct: 251 HQIRVHLQHLELPIVGDAKYGDFALNKALARANAKPGLKRMFLHAYRLKLTHPATGAPLQ 310

Query: 297 IHAPLEAHLEQALTKMRQ 314
             APL A     + ++ +
Sbjct: 311 FEAPLPAECRSFIAQLNE 328