Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., ribosomal large subunit pseudouridine synthase A (RefSeq) from Shewanella sp. ANA-3

 Score =  121 bits (304), Expect = 1e-32
 Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 12/207 (5%)

Query: 97  IVYEDDHLLILNKPSGT-AVHGGSGLHFGAIEA-LRALRPQARFLELVHRIDRDTSGILL 154
           ++Y+D  ++++NKPSG  +V G    H+ ++ A ++A  P     ++VHR+D  TSG+++
Sbjct: 16  VLYQDKDIIVVNKPSGLLSVPGRDPAHYDSVYARVKAEHPHC---QIVHRLDMATSGVIV 72

Query: 155 VAKKRSALRHLQAQFREKTVQKYYYALVMGHWDAECKVVNAPLLKNEVNSIVRVNPN--G 212
           VA  RSA R L+ QF ++   K Y A V GH       V+ PL+ +  N   +   +  G
Sbjct: 73  VALIRSAERELKRQFHDRETSKTYLARVAGHVKNTTGSVDYPLICDWPNRPKQKVDHEIG 132

Query: 213 KPSETRFRILEKFAEATLVQASPVTGRTHQIRVHTQYMGHPIAWDDRYGDRRFDAYTAQF 272
           KPS T F +L +   +TLV+  P+TGR+HQ+RVH   +GHPI  D  Y D       A+ 
Sbjct: 133 KPSLTHFEVLSRAKRSTLVKLKPITGRSHQLRVHMMALGHPILGDGFYADP-----LAKS 187

Query: 273 GIERLFLHAANIQFVHPASEKKLEIHA 299
              RL LHAA +   HP + + +   A
Sbjct: 188 LAPRLLLHAAELTIKHPYTGESMTFSA 214