Pairwise Alignments

Query, 174 a.a., 23S rRNA accumulation protein YceD from Vibrio cholerae E7946 ATCC 55056

Subject, 175 a.a., COG1399 protein, clustered with ribosomal protein L32p from Pseudomonas fluorescens FW300-N2E2

 Score = 75.1 bits (183), Expect = 6e-19
 Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 7/171 (4%)

Query: 6   IPRTVDPAKAAQKRLDFDGIIQVNLFKRLEESVAGVKRDAEVSLSFEIDEQQLVVISGKA 65
           IP  VDP K A +     G + +   KRL + ++      +    FE DE++ VVI    
Sbjct: 6   IPPHVDPRKLADRGTTLQGELLLADLKRLCDPLSDDVGTVQAKFVFERDERKSVVIHSFI 65

Query: 66  NIEVDLECQRCNEVFAHECEVEFTYTPYLGRKSEEDAPDEYDLVDLNEFGEVDLVQLVED 125
           + EV + CQRC E+       E +Y       + +  P  YD+++L E   +DL  L+E+
Sbjct: 66  DTEVKMVCQRCLELVTLPIHSECSYAVVKEGANTQSLPKGYDVLELGE-DPLDLQSLIEE 124

Query: 126 EFILNLPQVAMHDEADCSVDSDNLVFGELPEEVLEE--KPNPFDVLKSLKK 174
           E +L LP V  H   +C   +      + PE   +E  + NPF VL  LK+
Sbjct: 125 ELLLALPIVPAHHPEECQQPAG----ADEPEPSEDEVTRSNPFSVLAQLKR 171