Pairwise Alignments

Query, 174 a.a., 23S rRNA accumulation protein YceD from Vibrio cholerae E7946 ATCC 55056

Subject, 174 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  142 bits (358), Expect = 3e-39
 Identities = 74/173 (42%), Positives = 104/173 (60%), Gaps = 1/173 (0%)

Query: 1   MQKVKIPRTVDPAKAAQKRLDFDGIIQVNLFKRLEESVAGVKRDAEVSLSFEIDEQQLVV 60
           MQ VKIP ++DP +AA  RL + GI+   + KRL E  AG   D  VSL   +D Q +V 
Sbjct: 1   MQTVKIPVSIDPIRAASNRLSYQGIVPGKVLKRLRELTAGDCSDVTVSLECGVDLQGIVY 60

Query: 61  ISGKANIEVDLECQRCNEVFAHECEVEFTYTPYLGRKSEEDAPDEYDLVDLNEFGEVDLV 120
           + G A  E+ L CQRC  ++  E  V+F ++P       ++ PD YD ++ +E GE+ L 
Sbjct: 61  LKGTAVTELTLLCQRCMALYTTEVTVDFCFSPCRTEAEIDELPDAYDPIECDEIGEIRLQ 120

Query: 121 QLVEDEFILNLPQVAMHDEADCSVDSDNLVFGELPEEVLEEKPNPFDVLKSLK 173
           QLVEDE IL +P +  H   DC++ S ++V GE+ E   EE+PNPF VL+ LK
Sbjct: 121 QLVEDELILAMPLIPAHQNIDCNLGSQDIVVGEI-EAAQEERPNPFAVLEKLK 172