Pairwise Alignments

Query, 174 a.a., 23S rRNA accumulation protein YceD from Vibrio cholerae E7946 ATCC 55056

Subject, 173 a.a., Large ribosomal RNA subunit accumulation protein YceD from Enterobacter sp. TBS_079

 Score =  171 bits (434), Expect = 5e-48
 Identities = 83/174 (47%), Positives = 116/174 (66%), Gaps = 2/174 (1%)

Query: 1   MQKVKIPRTVDPAKAAQKRLDFDGIIQVNLFKRLEESVAGVKRDAEVSLSFEIDEQQLVV 60
           MQKVK+P T+DP + AQKRLD++GI   +  +R+ ESV  V  D E S+SF ID Q+L V
Sbjct: 1   MQKVKLPLTLDPVRTAQKRLDYEGIYTSDQAERVAESVVSVDSDVECSMSFAIDNQRLAV 60

Query: 61  ISGKANIEVDLECQRCNEVFAHECEVEFTYTPYLGRKSEEDAPDEYDLVDLNEFGEVDLV 120
           ++G A + V LECQRC + F       + ++P    +  E  P+ Y+ +++NEFGE+DL+
Sbjct: 61  LTGDAKVTVTLECQRCGKPFVQHVHTTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLL 120

Query: 121 QLVEDEFILNLPQVAMHDEADCSVDSDNLVFGELPEEVLEEKPNPFDVLKSLKK 174
            LVEDE IL+LP V +H+   C V   ++VFGELP+E   +KPNPF VL SLK+
Sbjct: 121 ALVEDEIILSLPVVPVHESEHCEVSEADMVFGELPDEA--QKPNPFAVLASLKR 172