Pairwise Alignments

Query, 316 a.a., 3-oxoacyl-ACP synthase III from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., 3-oxoacyl-(acyl carrier protein) synthase III (RefSeq) from Shewanella loihica PV-4

 Score = 57.4 bits (137), Expect = 5e-13
 Identities = 63/299 (21%), Positives = 110/299 (36%), Gaps = 27/299 (9%)

Query: 33  IVARTGIRERRIAADNETVADMAFFAAQNAINMAGIDKHDIDMIIVATTSASHTFPSAAC 92
           + A TGI ERR       ++D A  AA  +I   GID  D+  +I          P+ AC
Sbjct: 43  LAALTGIHERRWWPKGHRLSDGALAAAHKSIEETGIDVADLGAVIYTGVCRDQHEPATAC 102

Query: 93  QVQGKLGI-KGCPAFDLAAACSGFMYALSIADQHVKSGMCKHVLVIGADALSKTCD---- 147
           ++  +LG+ K    +D++ AC G +  +      ++ G  K  LV+  ++     D    
Sbjct: 103 RIAAELGVSKDTAIYDISNACLGVLSGILDIANRIELGQIKAGLVVSCESARHIVDITID 162

Query: 148 -----PTDRS---TIILFGDGAGAVVVGASNEPGILSTHIHADGEFGDLLSLEVPVRGGD 199
                PT ++   ++     G+GAV V  ++  G L        +      L  P     
Sbjct: 163 NMLAEPTMQNYAQSLATLTGGSGAVAVLLTD--GSLPLKSERQHQLLGASHLSAPEHHNL 220

Query: 200 SDKWLHMAGNEVF------------KVAVTQLSKLVVDTLKANNMHKSELDWLVPHQANY 247
               L  AG +++            K  V          L+  N    ++D ++ HQ   
Sbjct: 221 CQWGLQEAGTQLYREFMRTDGVALLKEGVELARHTWAHFLEQRNWLVEQVDKVICHQVGA 280

Query: 248 RIISATAKKLSMSLDQVVITLDRHGNTSAATVPTALDEAVRDGRIQRGQMLLLEAFGGG 306
                    L++  ++   T    GN    ++P     A   G +++G  +     G G
Sbjct: 281 SNRKQVLSALNIPQEKEFPTYQLLGNMGTVSLPVTAAMAHDQGFLRKGDQVSFLGIGSG 339