Pairwise Alignments

Query, 316 a.a., 3-oxoacyl-ACP synthase III from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase III (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 19/279 (6%)

Query: 52  ADMAFFAAQNAINMAGIDKHDIDMIIVATTSASHTFPSAACQVQGKLGIKGCPAFDLAAA 111
           A++   AA  A+  A +    ID++IVA       +P+ A ++Q  LG +G   +D+  A
Sbjct: 65  AEIGVEAALMALKQAELKAEQIDLVIVACAYTQRAYPAMAIEIQRALGTRGY-GYDMQVA 123

Query: 112 CSGFMYALSIADQHVKSGMCKHVLVIGADALSKTCDPTDRSTIILFGDGAGAVV------ 165
           CS   +A+  A   + +G    VLVI  +  S   +  DR +  +FGD A AVV      
Sbjct: 124 CSSATFAIVAAANAIATGSASRVLVINPEICSAQVNYRDRDSHFIFGDVATAVVLEEQSL 183

Query: 166 VGASNEPGILSTHIHAD------GEFGDLLSLEVPVRGGDSDKWLHMAGNEVFKVAVTQL 219
           V  +    ILS+    D        FG L   + P     +DK  H  G +VFK  +  +
Sbjct: 184 VAPNKGFTILSSRCFTDYSNNIRSNFGFLNRCD-PSSAHQADKLFHQQGRKVFKELLPMI 242

Query: 220 SKLVVDTLKANNMHKSELDWLVPHQANYRIISATAKKL---SMSLDQVVITLDRHGNTSA 276
            + + + L   ++       L  HQAN  +     KKL    ++ +Q  + LD + NT++
Sbjct: 243 YQHLDEHLAEQSLTPQSFKRLWLHQANINMNLFVVKKLLGDEVAPEQAPVVLDEYANTAS 302

Query: 277 ATVPTALDEAVRDGRIQRGQMLLLEAFGGGFTWGSALVK 315
           A    A  +   D     G + LL +FG G++ GS +++
Sbjct: 303 AGSVIAFHQYSAD--FNAGDLGLLSSFGAGYSIGSVILQ 339