Pairwise Alignments

Query, 316 a.a., 3-oxoacyl-ACP synthase III from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase III, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  227 bits (579), Expect = 3e-64
 Identities = 130/321 (40%), Positives = 191/321 (59%), Gaps = 9/321 (2%)

Query: 2   YSKILGTGSYLPSQVRTNADLEKMVETSDEWIVARTGIRERRIAADNETVADMAFFAAQN 61
           Y+ I G G  +P    TN DL   +ETSDEWI +RTGI +R I+  N   +++A  AA+ 
Sbjct: 3   YATITGWGKCVPPATLTNDDLATFIETSDEWIKSRTGISQRHISHVN--TSELASVAAKR 60

Query: 62  AINMAGIDKHDIDMIIVATTSASHTFPSAACQVQGKLGIKGCPAFDLAAACSGFMYALSI 121
           A+  AGI+  +IDMII+A+ S     P+ A  VQ  +G   C AFD+ AACSGF+Y L +
Sbjct: 61  ALAAAGIEGSEIDMIILASASPDTLIPNIASTVQANIGAN-CAAFDINAACSGFLYGLGL 119

Query: 122 ADQHVKSGMCKHVLVIGADALSKTCDPTDRSTIILFGDGAGAVVVGASNEP-GILSTHIH 180
           A   +KSG CK VLV+GA+ LS   D + R T +LFGDGAGAVVV A++ P G+L   ++
Sbjct: 120 ASSQIKSGQCKKVLVVGAERLSFYLDWSRRETAVLFGDGAGAVVVEATDIPGGVLGYELN 179

Query: 181 ADGEFGDLLSLEVPVR----GGDS-DKWLHMAGNEVFKVAVTQLSKLVVDTLKANNMHKS 235
            D +  D+L             DS D ++   G E+FK A+  ++KL    L+   + K 
Sbjct: 180 NDPDGRDILKAGFGTAMDRFSADSLDFYIQFDGQEIFKRAINGMNKLSTQVLEKCGVDKD 239

Query: 236 ELDWLVPHQANYRIISATAKKLSMSLDQVVITLDRHGNTSAATVPTALDEAVRDGRIQRG 295
           E+D ++PHQAN RII     ++ +  ++  + +  +GNTSAAT+P A+ +A+  G I+  
Sbjct: 240 EVDLVIPHQANERIIDTLVSRMKIPKEKAFVNIANYGNTSAATIPIAICDALEKGLIKPN 299

Query: 296 QMLLLEAFGGGFTWGSALVKF 316
           Q +L  AFG G T  + L+++
Sbjct: 300 QTILSCAFGAGLTSAALLLQW 320