Pairwise Alignments

Query, 414 a.a., beta-ketoacyl-[acyl-carrier-protein] synthase II from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) from Pseudomonas fluorescens FW300-N1B4

 Score =  372 bits (956), Expect = e-108
 Identities = 201/423 (47%), Positives = 279/423 (65%), Gaps = 14/423 (3%)

Query: 1   MSKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVK----- 55
           MS RRVVVTGMG++SP+G+ VE+ W  LLAG+SG+  +      + +T+  G V+     
Sbjct: 1   MSNRRVVVTGMGLVSPLGSGVEAVWARLLAGRSGLRALPDEVVADLTTKVGGAVQTLAED 60

Query: 56  ---GFDCEQYMSKKDARKMDLFIQYGIAAGIQALEDSGLEVNEENAA-RIGVAIGSGIGG 111
              GFD ++    K+ +KMD FI + + A  QALE +     + NA  R    IGSG+GG
Sbjct: 61  PEAGFDPDRATPPKEQKKMDRFIMFAMEAARQALEQADWHPQDVNAQERTATIIGSGVGG 120

Query: 112 LELIETGHQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNI 171
              I    +    +GPR++SPF +PS +VN+ AG++SI  G +GP  A  TAC  G+  I
Sbjct: 121 FGAIADAVRTTDNRGPRRLSPFTIPSFLVNLAAGHVSIEHGFKGPLGAPVTACAAGVQAI 180

Query: 172 GHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKDRDGF 230
           G AAR+I  G+AD  V GGAE A   + +AGF AA+ALS+  ND P++ASRP+D  RDGF
Sbjct: 181 GDAARLIRCGEADIAVCGGAEAAIDRVSLAGFAAARALSSGYNDTPERASRPFDSGRDGF 240

Query: 231 VLGDGAGIMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRD 290
           V+G+G+G++V+E  EHA ARGA+  AE+VG+G S DAYH+T+  EDGSG   AM  A+  
Sbjct: 241 VMGEGSGLLVIESLEHALARGAQPLAELVGYGTSADAYHLTAGPEDGSGARRAMSLALAQ 300

Query: 291 AGVTGEQIGYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSV 350
           AG++  Q+ ++NAH TSTP GD+ E+  IK   G     ++ V+STKS TGHLLGAAG +
Sbjct: 301 AGISPAQVQHLNAHATSTPVGDLGELAAIKSLFG--SDNKIAVTSTKSATGHLLGAAGGI 358

Query: 351 EAIITVMSLVDQMVPPTINLDNPEEGL-GVDLVPHVARKVESMEYAMCNSFGFGGTNGSL 409
           EAI T+++L DQ+VP T+N DNP+    GVD+V   AR + +++YA+ N FGFGG N S+
Sbjct: 359 EAIFTLLALRDQVVPATLNFDNPDPATQGVDIVHGQARPM-TIDYALSNGFGFGGVNASV 417

Query: 410 IFK 412
           +FK
Sbjct: 418 LFK 420