Pairwise Alignments

Query, 414 a.a., beta-ketoacyl-[acyl-carrier-protein] synthase II from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., 3-oxoacyl-(acyl carrier protein) synthase II (RefSeq) from Shewanella loihica PV-4

 Score =  250 bits (639), Expect = 5e-71
 Identities = 159/413 (38%), Positives = 232/413 (56%), Gaps = 11/413 (2%)

Query: 4   RRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTN-FSTRFAGLVKGFDCEQY 62
           RRVV+TG G ++ +G+   S  + L   Q+ +  I+ +D  +  +TR A  V  F+   +
Sbjct: 6   RRVVITGAGGVTALGHDWPSIAQRLQTMQNCVQRIDEWDRFDGLNTRLAAPVTDFEKPAH 65

Query: 63  MSKKDARKMDLFIQYGIAAGIQALEDSGLEVNE-ENAARIGVAIGSGIGGLELIETGHQA 121
            S+K  R M         A  +AL D+GL  +    +  +G+A GS  G  + I      
Sbjct: 66  YSRKKIRSMGRVSVMAAWASEKALMDAGLLDDPIVTSGAMGIAYGSSTGSTDPIIAFGDM 125

Query: 122 LIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYG 181
           L E     V+       + +  A N+ +  GL+G     S+ACT+G   IG+A   I YG
Sbjct: 126 LKEGDMSGVTATSYIRMMAHTTAVNVGVFFGLKGRVHTTSSACTSGSQGIGYAYEAIKYG 185

Query: 182 DADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGIMVL 241
             D M+AGGAE+   P     F    A ST+ND P +   P+D+DRDG V+G+GA  +VL
Sbjct: 186 QQDLMLAGGAEELC-PTEAVVFDTLFATSTKNDTPSETPSPFDRDRDGLVIGEGACTLVL 244

Query: 242 EEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYV 301
           EE EHAKARGAKIYAE+VGFG + D  H+T P+ +     +A+  A++DA +  ++IGYV
Sbjct: 245 EELEHAKARGAKIYAELVGFGTNSDGLHVTQPNAETM--EVAIRLALKDADLDADKIGYV 302

Query: 302 NAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVD 361
           NAHGT+T  GD+AE +  +   GE    ++ +SS KS TGH LGA G++EA ++V  +  
Sbjct: 303 NAHGTATDRGDIAETQATQAVFGE----RMPISSLKSYTGHTLGACGALEAWLSVEMMNA 358

Query: 362 QMVPPTINLDNPEEGLG-VDLVPHVARKVESMEYAMCNSFGFGGTNGSLIFKR 413
               PT+NL + +   G +D +    RK+ + +Y M N+F FGG N SLIFKR
Sbjct: 359 GWFAPTLNLKHIDPACGQLDYIKDEVRKL-TTDYVMSNNFAFGGINTSLIFKR 410