Pairwise Alignments

Query, 414 a.a., beta-ketoacyl-[acyl-carrier-protein] synthase II from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., beta-ketoacyl synthase (RefSeq) from Shewanella loihica PV-4

 Score =  277 bits (709), Expect = 4e-79
 Identities = 162/412 (39%), Positives = 240/412 (58%), Gaps = 14/412 (3%)

Query: 4   RRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQYM 63
           +RVV+TG+G++S +GN  +   ++L AG+SGI + + F+     +   G +K  D ++++
Sbjct: 2   KRVVITGLGIVSSIGNNKQEVTESLKAGRSGITHSDQFEEMKLRSHVWGDIK-LDPKEHI 60

Query: 64  SKKDARKMDLFIQYGIAAGIQALEDSGLEVNEENAARIGVAIGSGIGGLELIETGHQALI 123
            +K  R M     Y   A  QA+ D+GL   + +  R+G+  G+G             L 
Sbjct: 61  DRKALRFMGDAAAYAYIAMEQAIADAGLTEEQYSNHRVGIIAGTGGASSANQVQAADTLR 120

Query: 124 EKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDA 183
           EKG ++V P+ VP  + +  +  L+    ++G N +IS+AC T  H IGHA  +I  G  
Sbjct: 121 EKGVKRVGPYIVPRIMSSTASACLATPFKIKGMNYSISSACATSAHCIGHAVELIQMGKQ 180

Query: 184 DAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKDRDGFVLGDGAGIMVLE 242
           D + AGGAE+    L M GF A  ALST+ ND P+KASR +D DRDGFV+  G GI+V+E
Sbjct: 181 DMVFAGGAEEVDWTLTM-GFDAMGALSTKYNDCPEKASRTYDADRDGFVISGGGGIVVVE 239

Query: 243 EYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVN 302
           E EHA ARGAKIYAEV+G+G S D Y M +PS  G G    M+ A+         I Y+N
Sbjct: 240 ELEHALARGAKIYAEVIGYGASSDGYDMVAPS--GEGAVRCMKMALEGVDT---PIDYIN 294

Query: 303 AHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQ 362
            HGTSTP GD+ E++ +    G+       ++STKS+TGH LGAAG  EAI +++ + + 
Sbjct: 295 THGTSTPVGDMRELEALAETFGD---NLPAIASTKSLTGHALGAAGVHEAIYSLIMMENS 351

Query: 363 MVPPTINLDN-PEEGLGVDLVPHVARKVESMEYAMCNSFGFGGTNGSLIFKR 413
            + P+IN+D   E+  G+ +V     +   +   M NSFGFGGTN +L+ ++
Sbjct: 352 FIAPSINIDTLDEKAQGMPIVTEY--RDAELNTIMSNSFGFGGTNATLVMRK 401