Pairwise Alignments

Query, 414 a.a., beta-ketoacyl-[acyl-carrier-protein] synthase II from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase I (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  278 bits (710), Expect = 3e-79
 Identities = 164/411 (39%), Positives = 236/411 (57%), Gaps = 12/411 (2%)

Query: 4   RRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQYM 63
           +RVV+TGMG++S +GN  +   ++L AG+SGI +   F+     +   G +K  D  + +
Sbjct: 2   KRVVITGMGVVSSIGNNKQEVTESLKAGRSGITHSAQFEEMQLRSHVWGNIK-LDPSELI 60

Query: 64  SKKDARKMDLFIQYGIAAGIQALEDSGLEVNEENAARIGVAIGSGIGGLELIETGHQALI 123
            +K  R M     Y   A  +A++D+ L   + +  R+G+ +G+G             L 
Sbjct: 61  DRKALRFMGDAAAYAYIAMQEAIKDAQLTEEQYSNPRVGLIVGTGGASSSNQVQAADILR 120

Query: 124 EKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDA 183
           EKG ++V P+ VP  + +  +  L+    ++G N +IS+AC T  H IGHA  +I  G  
Sbjct: 121 EKGVKRVGPYIVPRIMASTASACLATPFKIKGMNYSISSACATSAHCIGHAVELIQMGKQ 180

Query: 184 DAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKDRDGFVLGDGAGIMVLE 242
           D + AGGAE+    L M GF A  ALST+ N  P KASR +D DRDGFV+  G GI+++E
Sbjct: 181 DMVFAGGAEELDWTLTM-GFDAMGALSTKYNATPDKASRTYDADRDGFVISGGGGILIVE 239

Query: 243 EYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVN 302
           E EHA ARGAKIYAEV+G+G S D Y M +PS  G G    M  A+ D       I Y+N
Sbjct: 240 ELEHALARGAKIYAEVIGYGASSDGYDMVAPS--GEGAVRCMRLALADVDT---PIDYIN 294

Query: 303 AHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQ 362
            HGTSTP GDV E++ ++    +   K   V+STKSMTGH LGAAG  EAI +++ + + 
Sbjct: 295 THGTSTPVGDVRELEALREVFKD---KCPPVASTKSMTGHALGAAGVHEAIYSLIMMENS 351

Query: 363 MVPPTINLDNPEEGLGVDLVPHVARKVESMEYAMCNSFGFGGTNGSLIFKR 413
            + P+IN+DN +E      +    R  E +   M NSFGFGGTN +L+ ++
Sbjct: 352 FIAPSINIDNLDEAAKDMPIVREYRDAE-LNTVMSNSFGFGGTNATLVMRK 401