Pairwise Alignments

Query, 414 a.a., beta-ketoacyl-[acyl-carrier-protein] synthase II from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Beta-ketoacyl synthase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  269 bits (688), Expect = 1e-76
 Identities = 163/415 (39%), Positives = 238/415 (57%), Gaps = 15/415 (3%)

Query: 4   RRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQYM 63
           RRVV+TGMG++SP+GNTV     +L AG+SGI   E +    F ++  G V     E ++
Sbjct: 2   RRVVITGMGIVSPIGNTVSEVEASLRAGRSGITFAETYAENGFRSQVHG-VPDIVLEDHI 60

Query: 64  SKKDARKMDLFIQYGIAAGIQALEDSGLEVNEENAARIGVAIGSGIGGLELIETGHQALI 123
            K++ R M     +   A  QA+ DSGLE +  +  R G+ +GSG           + + 
Sbjct: 61  DKRNLRFMGPGAAFNFIAMQQAIADSGLEDSNVSNERSGLIMGSGGPSTSNFFQAFKTVK 120

Query: 124 EKG-PRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGD 182
           EKG P+++ PF V   + +  +  L+    ++G N +I++AC+T  H IG+   +I  G 
Sbjct: 121 EKGAPKRMGPFMVTRCMSSTNSACLATPFKIKGVNYSITSACSTSAHCIGNGVELIQMGK 180

Query: 183 ADAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKDRDGFVLGDGAGIMVL 241
            D + AGG E+    L    F A  A+S++ ND P  ASR +D  RDGFV+  G G++VL
Sbjct: 181 QDIVFAGGGEEIDWTLSCL-FDAMGAMSSKYNDTPTTASRTFDATRDGFVIAGGGGVLVL 239

Query: 242 EEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVT---GEQI 298
           EE EHAKARGAKIYAEV G+G + D Y M +PS  G GG    E +MR A  T   G  +
Sbjct: 240 EELEHAKARGAKIYAEVTGYGATSDGYDMVAPS--GEGG----ERSMRQAIATLPEGRSV 293

Query: 299 GYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVMS 358
            Y+NAHGTSTP GDV E++ ++R  GE  T    V+STKS+TGH LGA G  EAI +++ 
Sbjct: 294 DYINAHGTSTPVGDVTEIEAVRRVFGEGTTPP--VASTKSLTGHSLGATGVHEAIYSLIM 351

Query: 359 LVDQMVPPTINLDNPEEGLGVDLVPHVARKVESMEYAMCNSFGFGGTNGSLIFKR 413
           +    +  + N+   +  +  + +    R+  +++  + NSFGFGGTN +L+  R
Sbjct: 352 MNKGFIAASANITELDPAIHPEEIVTELREGVTLDSVLSNSFGFGGTNATLLMSR 406