Pairwise Alignments

Query, 414 a.a., beta-ketoacyl-[acyl-carrier-protein] synthase II from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., 3-oxoacyl-[acyl-carrier-protein] synthase II (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  387 bits (994), Expect = e-112
 Identities = 202/420 (48%), Positives = 278/420 (66%), Gaps = 10/420 (2%)

Query: 1   MSKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCE 60
           M  +RVVVTG+G ++PVGN V   W+ L+ G SG   I HFD + F T+FA  VK FD  
Sbjct: 1   MELKRVVVTGLGAITPVGNDVPEFWENLVNGVSGAGPITHFDASQFKTQFACEVKNFDVT 60

Query: 61  QYMSKKDARKMDLFIQYGIAAGIQALEDSGLEVNEENAARIGVAIGSGIGGLELIET--- 117
           +Y+ +K+ARKMDL+ QY +A   +A+ DSGL+V +E+  RIGV  G+GIGG+   E    
Sbjct: 61  KYIDRKEARKMDLYTQYAVAVAKEAVSDSGLDVEKEDLNRIGVIFGAGIGGIHTFEEEVG 120

Query: 118 GHQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
            +    E GP K +PFF+P  I ++ AG +SIM G  GPN A  +AC T  + I  A  +
Sbjct: 121 NYYTHQEIGP-KFNPFFIPKMISDIAAGQISIMYGFHGPNYATCSACATSTNAIADAFNL 179

Query: 178 IAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAG 237
           I  G A+ +V+GG+E A  P G+ GF A  ALSTRNDEP KASRP+   RDGF++G+G G
Sbjct: 180 IRLGKANVIVSGGSEAAIFPAGVGGFNAMHALSTRNDEPSKASRPFSASRDGFIMGEGGG 239

Query: 238 IMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQ 297
            ++LEE EHAKARGAKIYAEV G GMS DA+H+T+   +G G  L M  A+ DA +  ++
Sbjct: 240 CLILEELEHAKARGAKIYAEVAGVGMSADAHHLTASHPEGLGAKLVMLNALEDAEMDPKE 299

Query: 298 IGYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVM 357
           + Y+N HGTSTP GD++E K IK   G+    ++ +SSTKSMTGHLLGAAG+VE+I +++
Sbjct: 300 VDYINVHGTSTPVGDISEAKAIKEVFGD-HAYELNISSTKSMTGHLLGAAGAVESIASIL 358

Query: 358 SLVDQMVPPTINLDNPEEGLGVD----LVPHVARKVESMEYAMCNSFGFGGTNGSLIFKR 413
           ++ + +VPPTIN +  +    +D       + A+K E +  A+ N+FGFGG N  +IFK+
Sbjct: 359 AIKNGIVPPTINHEEGDNDENIDYDLNFTFNKAQKRE-VNVALSNTFGFGGHNACVIFKK 417