Pairwise Alignments

Query, 324 a.a., DNA polymerase III subunit delta' from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., DNA-directed DNA polymerase (RefSeq) from Shewanella amazonensis SB2B

 Score =  152 bits (385), Expect = 8e-42
 Identities = 89/230 (38%), Positives = 125/230 (54%), Gaps = 4/230 (1%)

Query: 9   PWLVPVWQPWQAGLAAGKISSATLIQASEGVGVESLVELMARTLMCTSSQ-SEPCGFCHS 67
           PWL      + A L AG++  A L+   EG+G   LV  +A+T +CTS   S PCG C S
Sbjct: 5   PWLSQPLADFTALLTAGRMPHAVLVGVDEGLGASMLVNQLAQTALCTSPNVSGPCGQCKS 64

Query: 68  CGLMQSGNHPDFHVVKPEKIGKSITVEQIRQMNRIAQESSQLSGYRLIVIEPADAMNESS 127
           C L  +GNHPDF+ +K +  G  I ++QIR++      ++Q  G R+ +IE A+ MN +S
Sbjct: 65  CQLFSAGNHPDFYPIKAD--GTQIKIDQIRELIARLSSTAQQGGRRVAIIEAAERMNTAS 122

Query: 128 ANALLKTLEEPAPNCLFILVTSRIKHLLPTIVSRCQRLVLPAPTTALVVEWLKGQGITTP 187
           ANALLKTLEEP  N L +L ++    LLPT+ SRCQ+L   AP    +  WL  QG+ T 
Sbjct: 123 ANALLKTLEEPGANTLILLHSNTPARLLPTLQSRCQKLAFVAPNQRQIAAWLAQQGLGTD 182

Query: 188 AYALHLCADSPLKTRAFMLEGGAEKYHELESQLMNALS-GDVNAQLKCIA 236
           A         P+K   ++          +     ++LS G + A LK IA
Sbjct: 183 ALWCLPVVGGPIKLAEYLQNNYISVLENIRKDWRSSLSTGHLCASLKEIA 232