Pairwise Alignments

Query, 324 a.a., DNA polymerase III subunit delta' from Vibrio cholerae E7946 ATCC 55056

Subject, 909 a.a., DNA-directed DNA polymerase (RefSeq) from Shewanella amazonensis SB2B

 Score = 73.6 bits (179), Expect = 2e-17
 Identities = 76/284 (26%), Positives = 119/284 (41%), Gaps = 25/284 (8%)

Query: 22  LAAGKISSATLIQASEGVGVESLVELMARTLMCTSS-QSEPCGFCHSCGLMQSGNHPDFH 80
           L   ++  A L   + GVG  SL  L A+ L C     + PCG C +C  +  G   D  
Sbjct: 32  LGQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCEQGITATPCGQCSACREIAEGRFVDLI 91

Query: 81  VVKPEKIGKSITVEQIRQMNRIAQESSQLSGYRLIVIEPADAMNESSANALLKTLEEPAP 140
            V      K   V+  R++    Q       +++ +I+    +++SS NALLKTLEEP  
Sbjct: 92  EVDAASRTK---VDDTREILDNVQYRPSRGRFKVYLIDEVHMLSKSSFNALLKTLEEPPE 148

Query: 141 NCLFILVTSRIKHLLPTIVSRCQRLVLPAPT----TALVVEWLKGQGITTPAYALHLCAD 196
           +  F+L T+  + L  T++SRC +  L A T     A +   L G+G+     AL L A 
Sbjct: 149 HVKFLLATTDPQKLPVTVLSRCLQFNLKALTQPQIQAQLAAVLSGEGLGFDEDALSLLAK 208

Query: 197 S---------PLKTRAFMLEGGAEKYHELESQLMNALSGDVNAQLKCIALIDADLTTHLY 247
           +          L  +A    GG  +  ++++ L     G +       AL   D+ T L 
Sbjct: 209 AAAGSMRDALSLTDQAIAFGGGEVRLAQVQTMLGAIDKGQILNLFD--ALCQGDIETLL- 265

Query: 248 WVWCVLTDAQKIHFGVQQDYYPPASAALAGRFTYSKLHVQTASL 291
                 T    + FG   D    A   L  + + ++    TAS+
Sbjct: 266 -----TTARTAMGFGADADEVLRALLELLHQISLAQFAPATASI 304