Pairwise Alignments

Query, 324 a.a., DNA polymerase III subunit delta' from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., DNA polymerase III, delta'' subunit from Dechlorosoma suillum PS

 Score =  124 bits (312), Expect = 3e-33
 Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 36/333 (10%)

Query: 15  WQPWQAGLAAGKISSATLIQASEGVGVESLVELMARTLMCTSS--QSEPCGFCHSCGLMQ 72
           WQ  Q   A  ++  A L+    GVG   L    A  L+C +       CG C +C  + 
Sbjct: 11  WQRLQGRRA--QLPHALLLIGQRGVGKFELARAFAAGLLCEAPGMDGHACGQCSACNWLG 68

Query: 73  SGNHPDFHVVKP-----------EKIGKS-----ITVEQIRQMNRIAQESSQLSGYRLIV 116
            GNHPDF +V+P           E+ GK      IT++Q+R ++      +   G R+++
Sbjct: 69  QGNHPDFRLVQPAAMSDEEAEADEETGKKKPSQQITIDQVRGLDDFLHVGTHRQGVRIVL 128

Query: 117 IEPADAMNESSANALLKTLEEPAPNCLFILVTSRIKHLLPTIVSRCQRLVLPAPTTALVV 176
           + PA+AMN ++ANALLK+LEEP P+ LF+LV+S    LLPTI SRCQ + +P P+     
Sbjct: 129 LHPAEAMNRNTANALLKSLEEPRPDTLFLLVSSEADRLLPTIRSRCQTVEVPLPSPQAAT 188

Query: 177 EWLKGQGITTPAYALHLCADSPLKTRAFMLEGGAEKYHELESQLMNALSGDVNAQLKCIA 236
            WL  Q ++     L L   +P         G       L  QL      D    +   A
Sbjct: 189 AWLAAQKVSDGGRWLALAGGAPRLAAELAGSGQRSLLDALLGQLQKGRQLD---PIAAAA 245

Query: 237 LIDADLTTH----------LYWVWCVLTDAQKIHFGVQQDYYPPASAALAGRFTYSKLHV 286
           LI+  L             + W+     D   +  G+   Y+    A + G+   S   +
Sbjct: 246 LIEKTLKADKSGALTMKRTVEWLQKWSADLALVAEGLPPRYFQDDGATI-GQLAASSSTI 304

Query: 287 QTASLERLMEQLNQFS--GLNTELLLLQWLYQF 317
           +  +  RL+ +    S   LN  L+L +  + +
Sbjct: 305 KIINFNRLLIKFKAQSEHPLNLRLVLEELFFAY 337