Pairwise Alignments

Query, 324 a.a., DNA polymerase III subunit delta' from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., DNA polymerase III, delta prime subunit from Marinobacter adhaerens HP15

 Score =  123 bits (309), Expect = 6e-33
 Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 10/218 (4%)

Query: 1   MSNLNSLYPWLVPVWQPWQAGLAAGKISSATLIQASEGVGVESLVELMARTLMCT----- 55
           M+++    PWL   WQ  Q+ +A  ++  A ++    GVG  +  E +   L+C      
Sbjct: 1   MTDIAQDMPWLRRAWQTVQSRVAEDRLPHALILVGECGVGKRAWAEAVGGLLLCDQPLGR 60

Query: 56  -SSQSEPCGFCHSCGLMQSGNHPDFHVVKPEKIGKSITVEQIRQMNRIAQESSQLSGYRL 114
            + Q   CG C  C L+ + +HPD  +  PEK  + + V+Q+R ++  A  S Q++ +++
Sbjct: 61  EAGQPIACGRCKQCELLAAASHPDIRIYAPEK-SRMVKVDQVRALSSFAVASPQVAHHKV 119

Query: 115 IVIEPADAMNESSANALLKTLEEPAPNCLFILVTSRIKHLLPTIVSRCQRLVLPAPTTAL 174
            +I+ AD +N ++ANALLKTLEEP P+   IL+    + +LPTI SRCQ L +P P  + 
Sbjct: 120 AIIDRADQLNINAANALLKTLEEPLPDVTLILLQESGRPVLPTIRSRCQTLTVPVPGNSE 179

Query: 175 VVEWLKGQGITTPAYALHLCADSPLKTRAFMLEGGAEK 212
              WL  +    P  A      + +  +A ML G A +
Sbjct: 180 ANHWLASRVKNLPEDAQ---PSADVLAKALMLAGNAPR 214