Pairwise Alignments

Query, 324 a.a., DNA polymerase III subunit delta' from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., DNA polymerase III, delta prime subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  123 bits (309), Expect = 5e-33
 Identities = 69/172 (40%), Positives = 97/172 (56%), Gaps = 3/172 (1%)

Query: 9   PWLVPVWQPWQAGLAAGKISSATLIQASEGVGVESLVELMARTLMCTS-SQSEPCGFCHS 67
           PWL    Q +   L   K+  A L+      G E L   MAR  MC+  + +  CGFC S
Sbjct: 13  PWLDVPRQAFLTQLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQPTHTGGCGFCKS 72

Query: 68  CGLMQSGNHPDFHVVKPEKIGKSITVEQIRQMNRIAQESSQLSGYRLIVIEPADAMNESS 127
           C L  +GNHPDF+ ++ +  G  I V+QIR++      ++Q SG R+ +I  ++ +N +S
Sbjct: 73  CQLFDAGNHPDFYQIEAD--GHQIKVDQIRELCSRLSATAQQSGRRVAIIHHSERLNSAS 130

Query: 128 ANALLKTLEEPAPNCLFILVTSRIKHLLPTIVSRCQRLVLPAPTTALVVEWL 179
           ANALLKTLEEP  + L +L +     L+ TI SRCQRL   AP+  L+  WL
Sbjct: 131 ANALLKTLEEPGKDTLLLLHSDTPARLMATISSRCQRLPFVAPSKTLIKNWL 182