Pairwise Alignments

Query, 324 a.a., DNA polymerase III subunit delta' from Vibrio cholerae E7946 ATCC 55056

Subject, 1002 a.a., DNA polymerase III, gamma and tau subunits (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 72.8 bits (177), Expect = 3e-17
 Identities = 69/235 (29%), Positives = 104/235 (44%), Gaps = 19/235 (8%)

Query: 22  LAAGKISSATLIQASEGVGVESLVELMARTLMC-TSSQSEPCGFCHSCGLMQSGNHPDFH 80
           L   ++  A L   + GVG  SL  L A+ L C T   + PCG C SC  +  G   D  
Sbjct: 32  LTQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCETGVTASPCGVCGSCVEIAQGRFVDLI 91

Query: 81  VVKPEKIGKSITVEQIRQMNRIAQESSQLSGYRLIVIEPADAMNESSANALLKTLEEPAP 140
            V      K   V+  R++    Q       +++ +I+    ++ SS NALLKTLEEP  
Sbjct: 92  EVDAASRTK---VDDTRELLDNVQYRPTRGRFKVYLIDEVHMLSRSSFNALLKTLEEPPE 148

Query: 141 NCLFILVTSRIKHLLPTIVSRCQRLVLPAPTTALVVEWLK----GQGITTPAYALHLCAD 196
           +  F+L T+  + L  T++SRC +  L + T   +   L+     + +     AL L A 
Sbjct: 149 HVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQQEIGTQLQHILTQEQLPFEHEALGLLAK 208

Query: 197 S---------PLKTRAFMLEGGAEKYHELESQLMNALSGDVNAQLKCIALIDADL 242
           S          L  +A    GG    ++++S L +     V   LK  AL DAD+
Sbjct: 209 SANGSMRDALSLTDQAIAFGGGTVMLNQVQSMLGSIDEQHVLGLLK--ALTDADI 261