Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., Putative deoxyribonuclease YcfH from Pseudomonas fluorescens FW300-N2E2

 Score =  264 bits (674), Expect = 2e-75
 Identities = 135/255 (52%), Positives = 175/255 (68%), Gaps = 3/255 (1%)

Query: 1   MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60
           M VDSHCHLD+LD       +   LD A +  V + L +GV+ D+   + A+ E ++ V 
Sbjct: 1   MLVDSHCHLDRLDLAAHGGSLDAALDAARERGVGHFLCIGVSADNAADVKALAERYADVD 60

Query: 61  ASCGVHPLDVQSDFS--LDLFHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIET 118
            S GVHPLDVQ D +  LD   +   HPRVVAIGETGLDYHY+PE AD+Q+  FR  +E 
Sbjct: 61  CSVGVHPLDVQPDAAPALDWLLRELDHPRVVAIGETGLDYHYEPEAADVQQASFRLHLEA 120

Query: 119 AVALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISGI 178
           A    KP+IIHTR A+ DTL LLR+    Q G V+HCFTED   A+AA+++G+YIS+SGI
Sbjct: 121 ARQTGKPVIIHTRGARADTLALLRDAALPQAG-VLHCFTEDWDMAKAALDMGYYISLSGI 179

Query: 179 VTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVSL 238
           VTFR A  L++V   +P DRLL+ETDSPYLAP+P+RGK N P YV EVA ++A L+G S 
Sbjct: 180 VTFRNADALRDVASKVPADRLLVETDSPYLAPIPYRGKPNLPQYVREVAEFLAMLRGESY 239

Query: 239 TEVAQKTTQNFQNLF 253
              A++TT+NF+ LF
Sbjct: 240 ERFAEQTTENFKQLF 254