Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., Mg-dependent DNase from Pseudomonas stutzeri RCH2

 Score =  113 bits (283), Expect = 4e-30
 Identities = 78/254 (30%), Positives = 133/254 (52%), Gaps = 13/254 (5%)

Query: 12  LDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMI----EPFSQVYASCGVHP 67
           L +    A+ + V+++A  A V  ++  G +L      L +     E   +++++ GVHP
Sbjct: 10  LTHPTFAANPAAVVERAKAAGVVQMVLTGTSLAESEAALGLCRELDESGQRLFSTAGVHP 69

Query: 68  LDVQSDFSLDLFHQYA---QHPRVVAIGETGLDYHYQPETADLQKLRFRQQIETAVALNK 124
            D  S +S D   Q     + P V A+GE GLD++        Q+    +Q++ AV L  
Sbjct: 70  HDA-SQWSTDSAGQLRGLLREPPVRAVGECGLDFNRDFSPRPQQERALEEQLQLAVELQL 128

Query: 125 PLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISG-IVTFRQ 183
           P+ +H R+A +    +LR  +      V+HCFT + A   A ++L  +I I+G I   R+
Sbjct: 129 PVFLHERDASERLAAILRPFRDHLKAAVVHCFTGEKAALYAYLDLDLHIGITGWICDERR 188

Query: 184 ATDLKEVVKALPLDRLLIETDSPYLAPVPHRGK----ENQPAYVVEVAAYIAALKGVSLT 239
            T L  +V+ +P  RL++E+D+PYL P   R K    +N+PAY+ EV   +A  +G S  
Sbjct: 189 GTHLHPLVRDIPEGRLMLESDAPYLLPRSLRPKPKSGQNEPAYLPEVLREVAQHRGESAD 248

Query: 240 EVAQKTTQNFQNLF 253
           ++A+ TT+  ++ F
Sbjct: 249 QLAEHTTRCARSFF 262