Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., hydrolase, TatD family from Pseudomonas stutzeri RCH2

 Score =  259 bits (661), Expect = 5e-74
 Identities = 134/255 (52%), Positives = 172/255 (67%), Gaps = 3/255 (1%)

Query: 1   MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60
           M VDSHCHLD+LD       +   LD A    V + L +GV+ D+   + A+ E ++ V 
Sbjct: 1   MLVDSHCHLDRLDLTAHGGSLDAALDAARSRGVGHFLCIGVSADNAAAVKALAERYADVD 60

Query: 61  ASCGVHPLDVQ--SDFSLDLFHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIET 118
            S GVHPLD++  S   LD      QHP VVAIGETGLDYHY+PE A +Q+  FR  +E 
Sbjct: 61  CSIGVHPLDLEPTSQPVLDWLLGELQHPHVVAIGETGLDYHYEPEAAQMQQQSFRLHLEA 120

Query: 119 AVALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISGI 178
           A    KP+I+HTR A+ DTL LLRE    Q G V+HCFTED   A+AA++LGFYIS+SGI
Sbjct: 121 ARLTGKPVIVHTRAARADTLDLLREAALPQAG-VLHCFTEDWDMAKAALDLGFYISLSGI 179

Query: 179 VTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVSL 238
           VTFR A  L++V + +P DRLL+ETD+PYLAP+PHRGK N P YV EVA ++A L+GV  
Sbjct: 180 VTFRNADALRDVARKVPADRLLVETDAPYLAPIPHRGKANLPQYVREVAEFLAQLRGVPF 239

Query: 239 TEVAQKTTQNFQNLF 253
             +A++TT NF+ LF
Sbjct: 240 EVLAEQTTANFKTLF 254