Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., Putative deoxyribonuclease YcfH from Acidovorax sp. GW101-3H11

 Score =  213 bits (543), Expect = 2e-60
 Identities = 125/267 (46%), Positives = 167/267 (62%), Gaps = 18/267 (6%)

Query: 1   MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60
           MF DSHCHL+   + +L + +  +     +A+V   L +  T++ F  + A+       +
Sbjct: 1   MFTDSHCHLN---FPELVSQLPAIRQAMAEAQVTRALCICTTMEEFEGVHALALAHDNFW 57

Query: 61  ASCGVHPLD--VQSDFSLDLFHQYAQHPRVVAIGETGLDYHYQPET------ADL--QKL 110
           ++ GVHP +  V      DL  + A  PRVVAIGETGLDY+   +       ADL  Q+ 
Sbjct: 58  STVGVHPDNEGVTEPSVQDLLDRAAL-PRVVAIGETGLDYYGMEDRKGGRSIADLEWQRD 116

Query: 111 RFRQQIETAVALNKPLIIHTRNAQQDTLQLLRE----GKAQQCGGVIHCFTEDLAFAQAA 166
           RFR  I  A A  KPLIIHTR+A  DTL +LRE    G   Q GGV HCFTE +  A+AA
Sbjct: 117 RFRTHIRAARACGKPLIIHTRSASDDTLAILREEGEDGGGNQAGGVFHCFTESMQVARAA 176

Query: 167 MELGFYISISGIVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEV 226
           ++ G+YIS SGIVTF+ A +L++VV  +PLDR+LIETDSPYLAPVP+RGK N P+YV  V
Sbjct: 177 LDRGYYISFSGIVTFKSAQELRDVVAFVPLDRMLIETDSPYLAPVPYRGKTNNPSYVPHV 236

Query: 227 AAYIAALKGVSLTEVAQKTTQNFQNLF 253
           A  +A  KG++L  VA+ T++NF  LF
Sbjct: 237 ARQVAETKGLALEVVAEATSRNFDRLF 263