Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., Putative deoxyribonuclease YjjV from Xanthomonas campestris pv. campestris strain 8004

 Score =  120 bits (300), Expect = 4e-32
 Identities = 79/253 (31%), Positives = 128/253 (50%), Gaps = 7/253 (2%)

Query: 3   VDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVYAS 62
           +DSHCHLD  ++    AD + V+ +A  A V   +   +T  S+P +         ++ +
Sbjct: 4   IDSHCHLDASEFD---ADRAAVIARAKAAGVMQQVVPAITAASWPGLREACALAPGLHPA 60

Query: 63  CGVHP--LDVQSDFSLDLFHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIETAV 120
            G+HP  LD+     L+L  ++    R  AIGE GLD+      A  Q+  F  Q++ A 
Sbjct: 61  YGLHPIFLDLHRPEHLELLAEWIARERPCAIGECGLDFFLDGLDAQTQRHYFDGQLQLAK 120

Query: 121 ALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISGIVT 180
             + PLI+H R A ++ +  ++     +  GV+H F      AQ   +L F I + G VT
Sbjct: 121 RFDLPLIVHARRAVEEVIARIKAVGGIR--GVVHSFAGSPEQAQQLWKLDFMIGLGGPVT 178

Query: 181 FRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVSLTE 240
           + +A  L+ +   +PL+ LL+ETD+P       RG+ N+PA +  V   IA L+G     
Sbjct: 179 YPRANRLRGLAAQMPLEHLLLETDAPDQPDAEIRGQRNEPARLRTVLDCIAQLRGEPAEA 238

Query: 241 VAQKTTQNFQNLF 253
           +A +T+ N + LF
Sbjct: 239 IAAQTSANARRLF 251