Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., TatD family hydrolase from Synechocystis sp000284455 PCC 6803

 Score =  169 bits (429), Expect = 4e-47
 Identities = 104/256 (40%), Positives = 154/256 (60%), Gaps = 9/256 (3%)

Query: 3   VDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVYAS 62
           VD+H H++   +    AD+  +  +  QA V  L+   V    F ++ ++ + F +++ +
Sbjct: 4   VDTHVHIN---FDVFAADLDQLQHRWRQAGVVQLVHSCVKPQEFDQIQSLADRFPELFFA 60

Query: 63  CGVHPLDVQS--DFSLDLFHQYAQ-HPRVVAIGETGLDYHYQPETADLQKLRFRQQIETA 119
            G+HPLD +   D +      YA+   RVVAIGE GLD+ ++ +  D Q   FR Q+  A
Sbjct: 61  VGLHPLDAEDWQDNTAGQILAYAKADDRVVAIGEMGLDF-FKADNRDHQIEVFRAQLAIA 119

Query: 120 VALNKPLIIHTRNAQQDTLQLLREGKAQQ--CGGVIHCFTEDLAFAQAAMELGFYISISG 177
             LNKP+IIH R+A Q   Q+L + +A+     GV+HC+       Q  ++LGFYIS SG
Sbjct: 120 RELNKPVIIHCRDAAQTMRQVLTDFQAESGPVAGVMHCWGGTPEETQWFLDLGFYISFSG 179

Query: 178 IVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVS 237
            VTF++A  ++   + +P DRLL+ETD P+LAPVP RGK N+PA+V  VA  IAAL+ V 
Sbjct: 180 TVTFKKAEGIQASAQMVPPDRLLVETDCPFLAPVPQRGKRNEPAFVRHVAEAIAALRHVP 239

Query: 238 LTEVAQKTTQNFQNLF 253
           L  +AQ+TT N +NLF
Sbjct: 240 LETLAQQTTTNARNLF 255