Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  189 bits (480), Expect = 5e-53
 Identities = 97/256 (37%), Positives = 151/256 (58%), Gaps = 6/256 (2%)

Query: 1   MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60
           M +D+HCHLD   + D  A+   ++++A  A V  ++++   +  F  +LA+ E +  V+
Sbjct: 1   MLIDTHCHLD---FPDFEAERDAIIERARDAGVGQMVTISTRVKRFDTILAIAERYPNVF 57

Query: 61  ASCGVHP--LDVQSDFSLDLFHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIET 118
            S G HP   D + D + D   + + HP+VVAIGE GLDY Y     D Q +  R+ I  
Sbjct: 58  CSVGTHPHNADEELDVTADDLVRLSAHPKVVAIGEAGLDYFYDNAPRDAQAVGLRRHIAA 117

Query: 119 AVALNKPLIIHTRNAQQDTLQLLREGKAQQCGG-VIHCFTEDLAFAQAAMELGFYISISG 177
           A     PL+IH+R+A  D   +L E   +     ++HCF+     A+  +ELG Y+S SG
Sbjct: 118 ARTTGLPLVIHSRSADDDMAAILTEESGKGAFPFLLHCFSSGPDLARIGVELGGYVSFSG 177

Query: 178 IVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVS 237
           I+TF ++ +L+++ + +P DR+++ETD+PYLAP P RGK N+PAYV   A  +A   GVS
Sbjct: 178 ILTFPKSEELRDIARTVPRDRMIVETDAPYLAPKPFRGKRNEPAYVAHTAEVLAQAIGVS 237

Query: 238 LTEVAQKTTQNFQNLF 253
             E+A+ TT+N   +F
Sbjct: 238 REEIAEITTENAFRIF 253