Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., TatD-related deoxyribonuclease (NCBI) from Rhodospirillum rubrum S1H

 Score =  201 bits (511), Expect = 1e-56
 Identities = 104/256 (40%), Positives = 156/256 (60%), Gaps = 6/256 (2%)

Query: 1   MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60
           M VDSHCHLD   + D   D+  V+++A  A V  +L++   +  FP +LAM E F  V+
Sbjct: 1   MIVDSHCHLD---FPDFAPDIDAVVERARTAGVGTMLTICTHVSRFPGVLAMAERFPDVW 57

Query: 61  ASCGVHPLDVQSDFSLDL--FHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIET 118
            + G+HP +  ++  +D     +  ++PRVV +GETGLDY Y     + Q+  FR  +  
Sbjct: 58  CTVGIHPHEAANEAEVDAETLVRLTENPRVVGLGETGLDYFYDNSPREAQRRSFRAHLAA 117

Query: 119 AVALNKPLIIHTRNAQQDTLQLLREGKAQ-QCGGVIHCFTEDLAFAQAAMELGFYISISG 177
                 P++IHTR+A  DT  +LRE + +     ++HCF+     A  A+E+G Y+S+SG
Sbjct: 118 GRLSGLPVVIHTRDADADTAAILREEREKGPFKALLHCFSSGKDLADLAVEMGLYVSMSG 177

Query: 178 IVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVS 237
           I+TF +A D++  +  +PLDRLL+ETD+P+LAP P RGK N+PA VV  AA +A +KGV+
Sbjct: 178 ILTFPKAEDVRTAIADVPLDRLLVETDAPFLAPTPKRGKRNEPALVVHTAAKLAEVKGVA 237

Query: 238 LTEVAQKTTQNFQNLF 253
           +  +   TT NF  LF
Sbjct: 238 VEALWAATTDNFFTLF 253