Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., TatD family hydrolase from Rhodopseudomonas palustris CGA009

 Score =  203 bits (517), Expect = 3e-57
 Identities = 106/256 (41%), Positives = 159/256 (62%), Gaps = 6/256 (2%)

Query: 1   MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60
           M VDSHCHLD  D+ D   D++ ++ +A  + V  ++++   +   P ++A+ E F  VY
Sbjct: 1   MLVDSHCHLDFPDFAD---DLAGIVARAEASGVGRMVTISTRVRKLPDLVAIAERFPTVY 57

Query: 61  ASCGVHP--LDVQSDFSLDLFHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIET 118
            S G HP   D +   + D   + AQHP+VVA GE GLDY Y+  + + Q+  FR  I  
Sbjct: 58  CSVGTHPHHADEEDGIATDELVKLAQHPKVVAFGEAGLDYFYEMGSREAQERGFRAHIAA 117

Query: 119 AVALNKPLIIHTRNAQQDTLQLLREGKAQQC-GGVIHCFTEDLAFAQAAMELGFYISISG 177
           A     PL+IHTR A +D  ++L +   +     V+HC+T     A  A++LG  IS +G
Sbjct: 118 ARETGLPLVIHTREADEDCGKILEDEMGKGAFRAVLHCYTGGRDLAMQAIDLGLMISFTG 177

Query: 178 IVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVS 237
           I+TF+++  L+++   LP DR+L+ETDSPYLAP  +RGK N+P+YVVE A  +A ++GVS
Sbjct: 178 ILTFKKSQALRDLAAELPADRVLVETDSPYLAPGKYRGKRNEPSYVVETAKVLAEVRGVS 237

Query: 238 LTEVAQKTTQNFQNLF 253
           L E+A++TT+NF  LF
Sbjct: 238 LDEIARQTTENFFRLF 253