Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., putative hydrolase, TatD family from Phaeobacter inhibens DSM 17395

 Score =  195 bits (495), Expect = 9e-55
 Identities = 101/253 (39%), Positives = 152/253 (60%), Gaps = 6/253 (2%)

Query: 4   DSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVYASC 63
           DSHCHLD   + D   ++  ++ +A +A V  ++++   L + P + A+ E  + ++ + 
Sbjct: 14  DSHCHLD---FPDFEGELDALIARAAEAGVTRMVTICTKLRNEPSVRAIAEAHAPIFYAA 70

Query: 64  GVHPLDVQSD--FSLDLFHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIETAVA 121
           G HP+    +   S+D     AQHP+ V IGETGLDYHY  ++A++QK   R  I  A  
Sbjct: 71  GTHPMSAADEPLVSVDELVALAQHPKFVGIGETGLDYHYTADSAEVQKSSLRTHITAARE 130

Query: 122 LNKPLIIHTRNAQQDTLQLLREGKAQQCGG-VIHCFTEDLAFAQAAMELGFYISISGIVT 180
              PLIIH R A  D   +LR+  A+     V+HCF+     A+AA++LGFY+S+SGIV 
Sbjct: 131 TGLPLIIHARAADDDMAMILRDEMAKGAYSCVMHCFSSSPELARAALDLGFYLSMSGIVA 190

Query: 181 FRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVSLTE 240
           F ++ +L+++  A PL+R+L+ETD+PYLAP P+RGK N+PAY    A   A + GV   +
Sbjct: 191 FPKSQELRDIFAAAPLERILVETDAPYLAPPPYRGKRNEPAYTAHTARVGAEVFGVDYAD 250

Query: 241 VAQKTTQNFQNLF 253
            A +T  NF  LF
Sbjct: 251 FAAQTQANFDRLF 263