Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., hydrolase TatD from Pseudomonas aeruginosa PA14

 Score =  264 bits (675), Expect = 1e-75
 Identities = 137/255 (53%), Positives = 175/255 (68%), Gaps = 3/255 (1%)

Query: 1   MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60
           M VDSHCHLD+LD       +   LD A    V   L +GV+ D+   + A+ E ++ V+
Sbjct: 1   MLVDSHCHLDRLDLAAHGGSLDAALDAARARGVGQFLCIGVSADNAQAVKALAERYADVH 60

Query: 61  ASCGVHPLDVQ--SDFSLDLFHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIET 118
            S GVHPLD++  S  +LD       HPRVVAIGETGLDYHY+PE A+LQ+  FR  +E 
Sbjct: 61  CSVGVHPLDLEPGSAPALDWLLGELAHPRVVAIGETGLDYHYEPEAAELQQEAFRLHLEA 120

Query: 119 AVALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISGI 178
           A    KP+I+HTR A+ DTL LLRE    Q G V+HCFTED   A++A++LGFYIS+SGI
Sbjct: 121 ARITAKPVIVHTREARADTLALLREAALPQAG-VLHCFTEDWEMARSALDLGFYISLSGI 179

Query: 179 VTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVSL 238
           VTFR A  L+EV + +P DRLL+ETDSPYLAP+PHRGK N P YV +VA ++A L+GVSL
Sbjct: 180 VTFRNADALREVARQVPADRLLVETDSPYLAPIPHRGKPNLPEYVRDVAEFLATLRGVSL 239

Query: 239 TEVAQKTTQNFQNLF 253
             +A++TT NF  LF
Sbjct: 240 ETLAEQTTANFHRLF 254