Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

 Score =  108 bits (269), Expect = 1e-28
 Identities = 73/257 (28%), Positives = 142/257 (55%), Gaps = 20/257 (7%)

Query: 2   FVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVYA 61
           ++DSHCH++    + L+    D++ +A + KV+ + S G  L S  + + + E +  +Y 
Sbjct: 8   YIDSHCHVED---KSLNKYREDIVKRAFEKKVQMVTS-GTNLGSCRRAVELKEKYG-IYV 62

Query: 62  SCGVHPLDVQSDFS-LDLFHQY--AQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIET 118
           + G HP  V +D + ++  + +  ++   ++A+GE GLD+    E  + Q+  F++ I  
Sbjct: 63  TLGYHPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDF--DAENIERQENIFKKFINL 120

Query: 119 AVALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISGI 178
           +  +NKP++IH R  ++ +  +L+         + HC++  L  A+  ++ G +IS S +
Sbjct: 121 SKEVNKPVVIHARGMEERSYDILKNDVIS----MYHCYSGSLELAKELIKNGNFISYSTL 176

Query: 179 VTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALK--GV 236
           V F +    K +VK L L+ +++ETDSPYL+P+  +G++N+P  V+ V   I  LK    
Sbjct: 177 VCFSEHH--KNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVINVIETIWELKKDEY 232

Query: 237 SLTEVAQKTTQNFQNLF 253
           S+ E+ +    N + L+
Sbjct: 233 SMDEITKIIYNNTKRLY 249