Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis JJ

 Score =  112 bits (281), Expect = 6e-30
 Identities = 76/257 (29%), Positives = 144/257 (56%), Gaps = 20/257 (7%)

Query: 2   FVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVYA 61
           ++DSHCH++    + L+    D++++A   KV+ + S G  L S  + + + E +  +Y 
Sbjct: 8   YIDSHCHVED---KSLNKYREDIVNRAFDKKVQMVTS-GTNLGSCRRAVELKEKYG-IYV 62

Query: 62  SCGVHPLDVQSDFS-LDLFHQYAQ--HPRVVAIGETGLDYHYQPETADLQKLRFRQQIET 118
           + G HP  V +D + ++  + + Q     ++A+GE GLD+    E  + Q+  F++ I+ 
Sbjct: 63  TLGYHPGRVNADDNAIEKVYNFIQSKEKEILAVGEIGLDF--DAENIERQENIFKKFIKL 120

Query: 119 AVALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISGI 178
           A  +NKP++IH R  ++ + ++L+         + HC++  L  A+  +E G +IS S +
Sbjct: 121 AEEVNKPVVIHARGMEERSYEILKNDVIS----MYHCYSGSLELAKELIENGNFISYSTL 176

Query: 179 VTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALK--GV 236
           V F +    K +VK L L+ +++ETDSPYL+P+  +G++N+P  V++V   I  LK    
Sbjct: 177 VCFSEHH--KNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVIKVIETIWELKKDEY 232

Query: 237 SLTEVAQKTTQNFQNLF 253
           +L E+ +    N + L+
Sbjct: 233 ALDEITKIIYNNTKRLY 249