Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., 3'-5' ssDNA/RNA exonuclease TatD from Enterobacter sp. TBS_079

 Score =  127 bits (318), Expect = 3e-34
 Identities = 78/241 (32%), Positives = 126/241 (52%), Gaps = 7/241 (2%)

Query: 20  DVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVYASCGVHPLDVQ--SDFSLD 77
           D  +V+ +A  A V+ LL  G  L    +   + + + + +++ GVHP D    +  S +
Sbjct: 16  DCDEVVARAFAAGVKGLLLTGTNLHESEQAQQLAQRYDRCWSTAGVHPHDSSQWTPQSAE 75

Query: 78  LFHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIETAVALNKPLIIHTRNAQQDT 137
           + H+ A+ P VVAIGE GLD++    T   Q+  F  Q+  A  L  P+ +H R+A +  
Sbjct: 76  IIHRLAKTPEVVAIGECGLDFNRNFSTPAEQENAFTAQLALAAELGMPVFMHCRDAHERF 135

Query: 138 LQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISG-IVTFRQATDLKEVVKALPL 196
           L LL     +  G V+HCFT     A   +E G Y+ I+G +   R+  +L+E++  +P 
Sbjct: 136 LALLEPWLDKLPGAVLHCFTGSRQEALDCLERGLYLGITGWVCDERRGLELRELLPVIPA 195

Query: 197 DRLLIETDSPYLAPVPHRGK----ENQPAYVVEVAAYIAALKGVSLTEVAQKTTQNFQNL 252
           DRLL+ETD+PYL P   + K     N+PAY+  +   +A  +G     +  +T  N + L
Sbjct: 196 DRLLVETDAPYLLPRDMQPKPASRRNEPAYLGHILESVARWRGEDPHWLCAQTDDNVRRL 255

Query: 253 F 253
           F
Sbjct: 256 F 256