Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., hydrolase, TatD family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  155 bits (392), Expect = 8e-43
 Identities = 85/254 (33%), Positives = 146/254 (57%), Gaps = 6/254 (2%)

Query: 3   VDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVYAS 62
           V+SH HLD   + +   D+ DVL +A QA +  + +V +   ++ +   + +    V+  
Sbjct: 21  VESHAHLDLDAFAE---DLGDVLQRAQQAGIARMGNVFLGPQAYARNRHLFDSHPSVFFL 77

Query: 63  CGVHPLDVQS--DFSLDLFHQ-YAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIETA 119
            G+HP +  +  + +LD   + +A  PR+ A+GE GLD+++     D+Q+  FR Q+  A
Sbjct: 78  LGIHPCEGHTCDEAALDAMRKAFASDPRLRAVGEIGLDFYWDDCPPDVQRAAFRAQLALA 137

Query: 120 VALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISGIV 179
             +++P++IH R+A ++T+ +L     +    + HCF  D   A+  ++ G++ISI G V
Sbjct: 138 REVSRPVVIHARDAAEETIAILEGDGFRGYPVLWHCFGGDAPLAERIVDNGWHISIPGPV 197

Query: 180 TFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVSLT 239
           T+   T L+E V  +P+DRL++ETD PYL PVP+RGK N+PAYVV  A  +A  +G+   
Sbjct: 198 TYPANTALREAVHVIPVDRLMLETDCPYLTPVPYRGKRNEPAYVVFTAQCVAKERGMDTA 257

Query: 240 EVAQKTTQNFQNLF 253
           ++      N +  F
Sbjct: 258 DLWTTAGDNARRFF 271