Pairwise Alignments

Query, 500 a.a., PTS glucose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., PTS system, glucose-specific IIBC component (RefSeq) from Shewanella amazonensis SB2B

 Score =  400 bits (1027), Expect = e-116
 Identities = 210/494 (42%), Positives = 306/494 (61%), Gaps = 21/494 (4%)

Query: 11  VSPSNSNNLIRSINMFKNAFANLQKVGKALMLPVSVLPVAGILLGVGAANFSWLPEVVSH 70
           ++P++S    R   + ++ F   Q++ + L++P+++LP AG+++G+      ++P+V + 
Sbjct: 1   MAPASSARPERLTRLNRHWFRFAQRLSQTLLIPIAILPAAGVMIGIATNPLPFIPDVANV 60

Query: 71  LMEQAGGSVFGQMPLLFAVGVALGFTNNDGVSGLSAIVGYGIMVATLKVMATVM------ 124
           LM   G  +F  MP+LFA+ VA+GF  + G++  SA  GYG++++TL   A V       
Sbjct: 61  LMLSVGKLIFDIMPMLFAIAVAIGFCRDQGIAAFSAAFGYGVLLSTLAAAAKVYHLPSHI 120

Query: 125 --GVSGIDTGVLGGILAGGVAAWSFNRFYKIQLPEYLGFFAGKRAVPIITGFISIALGVV 182
             G   IDTG+ GG+L GG+   +     K++LP    FF G+R+ P+I   + + L V+
Sbjct: 121 VWGTPTIDTGIAGGMLVGGITCVAVRLSEKLRLPAVFSFFEGRRSAPLIMIPLVMLLAVM 180

Query: 183 LSFIWPPIGSAIATFSDWAANQDPVTAFGIYGIVERSLIPFGLHHIWNVPFFYQAGTCVN 242
           L+FIWPP+  +I   SDWA  Q+P  AFG YG+VER L+P GLHHIWN PF+ + G   +
Sbjct: 181 LAFIWPPLALSIERLSDWAVYQEPAIAFGFYGMVERLLLPLGLHHIWNAPFYLEVGQYAH 240

Query: 243 GAGETVNGIMTCFLTADDASRAAGNGFGQLAGGYLFKMFGLPAAAFAIAHCAKPENRAKV 302
             GE V G M  +   D ++       G LAGGYL KM+GLPAAA AI  CA    R +V
Sbjct: 241 D-GEIVRGEMARYFAGDPSA-------GNLAGGYLIKMWGLPAAALAIWRCADRNQRNRV 292

Query: 303 MGIMASAALTSFLTGITEPIEFAFLFVAPVLYAIHAVLAGLAYVLTNALGVVHGHTFSNG 362
            G+M SAA  S+LTG+TEPIEFAFLFVAP+LY  HA+L GLAY +   L + H   FS+G
Sbjct: 293 AGVMLSAATASWLTGVTEPIEFAFLFVAPLLYLCHALLTGLAYSIAILLDMHHSVVFSHG 352

Query: 363 FIDFVVQSPRADNMLLLVGLGIGYAVLYYVVFTFVIRALNLKTPGREDESADKSASSGNE 422
            +DFV+  P++ N   +  LG    V+YY++F   I A NLKTPGR +     +    N 
Sbjct: 353 LVDFVLLFPQSSNTHWIWFLGPLTFVIYYILFRASILAFNLKTPGRFEAD---TGQKRNL 409

Query: 423 LAGDLVAAFGGKANITNLDACITRLRVSVADTALVDQDKLKKLGAAGVVMVSGGVQAIFG 482
           +A  +V+A GG  NI +L AC+TRLR+SVAD + VD+ +L  LGA GV++V  GVQ +FG
Sbjct: 410 IA--IVSALGGGGNIADLSACLTRLRISVADPSQVDRQRLMSLGAKGVIVVGSGVQLVFG 467

Query: 483 TKSDNLKTEMDEWI 496
           TK++ L+  +  ++
Sbjct: 468 TKAETLRKLLQRYL 481