Pairwise Alignments

Query, 500 a.a., PTS glucose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 517 a.a., PTS transporter subunit EIIC from Rahnella sp. WP5

 Score =  339 bits (869), Expect = 2e-97
 Identities = 202/508 (39%), Positives = 293/508 (57%), Gaps = 46/508 (9%)

Query: 30  FANLQKVGKALMLPVSVLPVAGILLGVGAA----------NFSWLP--EVVSHLMEQAGG 77
           F   QK GK+ MLP+++LP AG+LLG+G A           F  +P  + +  +M  AG 
Sbjct: 13  FERAQKFGKSFMLPIAILPAAGLLLGIGGALSNPNTLTAYPFLNIPALQAIFTVMASAGS 72

Query: 78  SVFGQMPLLFAVGVALGFTNND-GVSGLSAIVGYGIMVATLKVMATV------------- 123
            VF  + +LFAVGVA+G   +D G +GLSA++GY +M AT+  +  +             
Sbjct: 73  IVFANLAVLFAVGVAVGLARSDKGTAGLSALLGYLVMNATINAILILKGQLVTTNLSAAG 132

Query: 124 ----MGVSGIDTGVLGGILAGGVAAWSFNRFYKIQLPEYLGFFAGKRAVPIITGFISIAL 179
               +G+  ++TGV GG++ G V  W   R+ KI+LP++LGFF G R VPII+   +I +
Sbjct: 133 QGMALGIQTLETGVFGGVVIGLVTWWLHQRYNKIELPQFLGFFGGSRFVPIISSVAAIVV 192

Query: 180 GVVLSFIWPPIGSAIATFSDWAANQDPVTAFGIYGIVERSLIPFGLHHIWNVPFFYQAGT 239
           G ++ FIWP     I            +  F IYG V R L PFGLHHI+ +PF+    T
Sbjct: 193 GALMFFIWPHFQKLIFGMGGLVDATGYLGTF-IYGFVLRMLGPFGLHHIFYLPFWT---T 248

Query: 240 CVNGA----GETVNGIMTCFLT--ADDASRAAGNGFGQ-LAGGYLFKMFGLPAAAFAIAH 292
            + G+    G  V G    F    AD  ++    G  + ++G ++  MFGL  A  A+ H
Sbjct: 249 ALGGSEVINGHLVEGTQRIFFAQLADPNTQQFYIGTSRFMSGRFITMMFGLVGACLAMYH 308

Query: 293 CAKPENRAKVMGIMASAALTSFLTGITEPIEFAFLFVAPVLYAIHAVLAGLAYVLTNALG 352
            A+PEN+ +V G++ SAALTSFLTGITEPIEF+FLFVAP+LY +HAV  GLA+++ + L 
Sbjct: 309 TARPENKKRVAGLLLSAALTSFLTGITEPIEFSFLFVAPMLYVLHAVFDGLAFMIAHILQ 368

Query: 353 VVHGHTFSNGFIDF----VVQSPRADNMLLLVGLGIGYAVLYYVVFTFVIRALNLKTPGR 408
           +  G TFS GFIDF    V+Q     + + +  +G+ +  LYY  F ++IR  NLKTPGR
Sbjct: 369 ITIGQTFSGGFIDFILFGVLQGESKTHWMYVPLVGVPWFALYYFSFRYLIRRFNLKTPGR 428

Query: 409 EDESADKSASSGNELAGDLVAAFGGKANITNLDACITRLRVSVADTALVDQDKLKKLGAA 468
            DE+  +  +   + AG ++ A GG  NI  LD C TRLR+SV   + V+++KLK  GA 
Sbjct: 429 -DEAEIQQDNVVTDRAGLIIEALGGATNIAELDCCATRLRISVHQASEVNENKLKSSGAR 487

Query: 469 GVVMVSGGVQAIFGTKSDNLKTEMDEWI 496
            V++   G+Q I+G     +K E++E +
Sbjct: 488 AVLIRGNGIQVIYGPHVTIIKNEIEEML 515