Pairwise Alignments

Query, 500 a.a., PTS glucose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., PTS system, glucose-like IIB subunint (RefSeq) from Shewanella loihica PV-4

 Score =  373 bits (957), Expect = e-108
 Identities = 195/494 (39%), Positives = 298/494 (60%), Gaps = 21/494 (4%)

Query: 11  VSPSNSNNLIRSINMFKNAFANLQKVGKALMLPVSVLPVAGILLGVGAANFSWLPEVVSH 70
           + P++     R   + +  F   Q++ +AL+LP+++LP AG+++G+      ++   ++ 
Sbjct: 5   MDPTHQRPRGRLSRISRQWFKFAQRLSQALLLPIAILPAAGVMIGLATNPIPFISADLAT 64

Query: 71  LMEQAGGSVFGQMPLLFAVGVALGFTNNDGVSGLSAIVGYGIMVATLKVMATV------- 123
           LM   G  VF  MP+LFAV +A+GF  + G++  SA+ GYG+  ++L  +A +       
Sbjct: 65  LMWTVGNLVFSMMPMLFAVTIAIGFCRDQGIAAFSAVFGYGVFFSSLSALAKIYHLPTEM 124

Query: 124 -MGVSGIDTGVLGGILAGGVAAWSFNRFYKIQLPEYLGFFAGKRAVPIITGFISIALGVV 182
            +G + IDTG+ GG++ G           +I+LP    FF G+R+ P++   ++I L  +
Sbjct: 125 ILGQATIDTGIAGGMMVGAFTCLVVKHSERIRLPAVFSFFEGRRSAPLLMLPMAILLAYL 184

Query: 183 LSFIWPPIGSAIATFSDWAANQDPVTAFGIYGIVERSLIPFGLHHIWNVPFFYQAGTCVN 242
              +WP + + I   S+WA  Q+P +AF +YG+VER LIP GLHHIWN PF+ + G   N
Sbjct: 185 FLLLWPLLSNWIEQISNWAVYQEPASAFAVYGMVERLLIPLGLHHIWNAPFYLEMGQYFN 244

Query: 243 GAGETVNGIMTCFLTADDASRAAGNGFGQLAGGYLFKMFGLPAAAFAIAHCAKPENRAKV 302
           G  E V G +  +L  D  +       G LAGGYL KM+GLPAAA AI  CA    R +V
Sbjct: 245 G-DEWVRGEVARYLAGDPQA-------GNLAGGYLIKMWGLPAAALAIWRCADKHERNRV 296

Query: 303 MGIMASAALTSFLTGITEPIEFAFLFVAPVLYAIHAVLAGLAYVLTNALGVVHGHTFSNG 362
            GIM SAA   +LTG+TEPIEFAF+FVAP+L+ +HA++ G+AY +T +L + H   FS+G
Sbjct: 297 AGIMLSAATACWLTGVTEPIEFAFMFVAPLLFILHALMTGIAYAVTISLDIHHSVVFSHG 356

Query: 363 FIDFVVQSPRADNMLLLVGLGIGYAVLYYVVFTFVIRALNLKTPGREDESADKSASSGNE 422
            +DF +   ++ N+   + LG   AV+YY+VF   I A NLKTPGR +  + + A     
Sbjct: 357 LVDFSLLLGQSRNVEWFLILGPLTAVIYYLVFRGAILAFNLKTPGRMEAGSGQRAG---- 412

Query: 423 LAGDLVAAFGGKANITNLDACITRLRVSVADTALVDQDKLKKLGAAGVVMVSGGVQAIFG 482
               ++ A GG+ NI  L AC+TRLR+SV    LVD+ +L KLGA GVV+V  GVQ ++G
Sbjct: 413 -LISMITALGGQDNINELTACLTRLRISVKHAELVDKAQLNKLGAKGVVLVGNGVQLVYG 471

Query: 483 TKSDNLKTEMDEWI 496
           TK+++++  +  ++
Sbjct: 472 TKAESIRRLLQRYL 485