Pairwise Alignments

Query, 500 a.a., PTS glucose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., PTS system, glucose-specific IIBC component (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  384 bits (987), Expect = e-111
 Identities = 202/475 (42%), Positives = 292/475 (61%), Gaps = 18/475 (3%)

Query: 30  FANLQKVGKALMLPVSVLPVAGILLGVGAANFSWLPEVVSHLMEQAGGSVFGQMPLLFAV 89
           F   Q++ +AL++P+++LP AG++LG+  +   ++PEV++ LM   G  +F  MP+LFAV
Sbjct: 25  FKFAQRLSQALLIPIAILPAAGVMLGLTVSPIPFMPEVLNVLMLAVGKLIFAIMPILFAV 84

Query: 90  GVALGFTNNDGVSGLSAIVGYGIMVATLKVMAT--------VMGVSGIDTGVLGGILAGG 141
            VA+GF  + G++  +A+ GYG+M ATL  +A         V+G+  +DTG+ GG+L GG
Sbjct: 85  AVAIGFCRDQGIAAFTAVFGYGVMTATLAALADLYQLPTQLVLGMETLDTGIAGGMLIGG 144

Query: 142 VAAWSFNRFYKIQLPEYLGFFAGKRAVPIITGFISIALGVVLSFIWPPIGSAIATFSDWA 201
           V  ++      I+LP    FF G+R+  ++   +++ LG VL+ IWP +   I   SDWA
Sbjct: 145 VTCFAVRWSQYIRLPAIFSFFEGRRSASLLIIPLAMGLGYVLAHIWPSLSLLIERVSDWA 204

Query: 202 ANQDPVTAFGIYGIVERSLIPFGLHHIWNVPFFYQAGTCVNGAGETVNGIMTCFLTADDA 261
             Q P  AFG+YG +ER LIP GLHHIWN PF+ + G       E V G +  +L  D  
Sbjct: 205 VYQKPAIAFGVYGALERLLIPLGLHHIWNAPFYLEVGQYQLQDAEVVRGEVARYLAGDPQ 264

Query: 262 SRAAGNGFGQLAGGYLFKMFGLPAAAFAIAHCAKPENRAKVMGIMASAALTSFLTGITEP 321
           +       G LAGGYL KM+GLPAAA AI  CA    R +V GIM SAA  S+LTG+TEP
Sbjct: 265 A-------GNLAGGYLIKMWGLPAAALAIWRCADNSERNRVAGIMLSAAAASWLTGVTEP 317

Query: 322 IEFAFLFVAPVLYAIHAVLAGLAYVLTNALGVVHGHTFSNGFIDFVVQSPRADNMLLLVG 381
           IEFAF+FVAP+L+ IH +L+GLAY +   L + H   FS+G +DF +    + N      
Sbjct: 318 IEFAFMFVAPLLFLIHVMLSGLAYFVCIMLDIHHSIVFSHGLVDFTLLFSLSRNTGWFAV 377

Query: 382 LGIGYAVLYYVVFTFVIRALNLKTPGREDESADKSASSGNELAGDLVAAFGGKANITNLD 441
           LG   AV+YY++F   I A NLKTPGR      K +    E    ++AA GG+ NI  L+
Sbjct: 378 LGPLTAVIYYILFRGSILAFNLKTPGRLQSDGTKGS---KESLRAIIAALGGRDNIVELN 434

Query: 442 ACITRLRVSVADTALVDQDKLKKLGAAGVVMVSGGVQAIFGTKSDNLKTEMDEWI 496
           AC+TRLR+SV    LV++ +L +LGA GV+++  GVQ ++GTK++ L+  +  ++
Sbjct: 435 ACLTRLRLSVHSPELVNKVRLSQLGAKGVIVMGKGVQIVYGTKAETLRKVLQRYL 489