Pairwise Alignments

Query, 500 a.a., PTS glucose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., PTS system, glucose-like IIB subunint (RefSeq) from Shewanella sp. ANA-3

 Score =  375 bits (962), Expect = e-108
 Identities = 196/458 (42%), Positives = 282/458 (61%), Gaps = 18/458 (3%)

Query: 47  LPVAGILLGVGAANFSWLPEVVSHLMEQAGGSVFGQMPLLFAVGVALGFTNNDGVSGLSA 106
           +P AG++LG+  +   ++PEV++ LM   G  +F  MP+LFAV VA+GF  + G++  +A
Sbjct: 1   MPAAGVMLGLTVSPIPFMPEVLTVLMLAVGKLIFAIMPILFAVAVAIGFCRDQGIAAFTA 60

Query: 107 IVGYGIMVATLKVMATV--------MGVSGIDTGVLGGILAGGVAAWSFNRFYKIQLPEY 158
           + GYG+M ATL  +A +        +G+  +DTG+ GG+L GGV  ++      I+LP  
Sbjct: 61  VFGYGVMTATLAALADLYQLPTQLLLGMETLDTGIAGGMLIGGVTCFAVRWSQYIRLPAI 120

Query: 159 LGFFAGKRAVPIITGFISIALGVVLSFIWPPIGSAIATFSDWAANQDPVTAFGIYGIVER 218
             FF G+R+  ++   +++ LG +L+ +WPP+   I   SDWA  Q P  AFG+YG +ER
Sbjct: 121 FSFFEGRRSASLLIIPLAMGLGYILAHVWPPLSLLIERVSDWAVYQKPAIAFGVYGALER 180

Query: 219 SLIPFGLHHIWNVPFFYQAGTCVNGAGETVNGIMTCFLTADDASRAAGNGFGQLAGGYLF 278
            LIP GLHHIWN PF+ + G       E V G +  +L  D  +       G LAGGYL 
Sbjct: 181 LLIPLGLHHIWNAPFYLEVGQYQLQNSEVVRGEVARYLAGDPQA-------GNLAGGYLI 233

Query: 279 KMFGLPAAAFAIAHCAKPENRAKVMGIMASAALTSFLTGITEPIEFAFLFVAPVLYAIHA 338
           KM+GLPAAA AI  CA+P  R +V GIM SAA  S+LTG+TEPIEFAF+FVAP L+ IH 
Sbjct: 234 KMWGLPAAALAIWRCAEPSERNRVAGIMLSAAAASWLTGVTEPIEFAFMFVAPFLFLIHV 293

Query: 339 VLAGLAYVLTNALGVVHGHTFSNGFIDFVVQSPRADNMLLLVGLGIGYAVLYYVVFTFVI 398
           +L+GLAY +   L + H   FS+G +DF +    + N    V LG   AV+YY++F   I
Sbjct: 294 LLSGLAYFVCIMLDIHHSIVFSHGLVDFTLLFSLSRNTGWFVFLGPLTAVIYYLLFRGSI 353

Query: 399 RALNLKTPGREDESADKSASSGNELAGDLVAAFGGKANITNLDACITRLRVSVADTALVD 458
            A NLKTPGR +      A    E    ++AA GG+ NI  L+AC+TRLR+SV    LV+
Sbjct: 354 LAFNLKTPGRLEPDEPHGA---KESLRAIIAALGGRENIVELNACLTRLRLSVHSPELVN 410

Query: 459 QDKLKKLGAAGVVMVSGGVQAIFGTKSDNLKTEMDEWI 496
           + +L +LGA GV+++  GVQ ++GTK++ L+  +  ++
Sbjct: 411 KVRLSQLGAKGVIVMGKGVQVVYGTKAETLRKVLQRYL 448