Pairwise Alignments

Query, 486 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., Sodium-dependent transporter family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  150 bits (379), Expect = 8e-41
 Identities = 119/445 (26%), Positives = 203/445 (45%), Gaps = 56/445 (12%)

Query: 37  GGGAFFIPYLFAMVTAGIPFMILEFSMGQKHRGSAPTTLAKI-----HS-KFEWLGWFQV 90
           GGGAF + +L  +   G P M+ E  +G++ R S    L  +     HS K+ W  +  +
Sbjct: 6   GGGAFVLMFLACIALIGAPVMLAETLIGRRARQSPANALKVLAVEAGHSTKWSWGAFAGM 65

Query: 91  GIAAVIAVYYVAVIGWAISYF---GMSFTQSWGSDTNAYFFSEYLKLGDNSPTNLGSIQW 147
             A +I  +Y  V GW++ Y    G    Q    D    +F   +      P  L    W
Sbjct: 66  ITALLILSFYSVVGGWSLDYIIDMGRGDFQGATPDQVGAYFGNVIA----DPWRL--TLW 119

Query: 148 HIAFAMLIAWVITYAAIVGGVKKGIERASKIMMPILFIMVLILIARMIFLPGALDGVNYM 207
           H  F +L A VI       GV  G+ER+ +IMMP+LF+M+L+L+   +     ++GV++M
Sbjct: 120 HTIFMVLSAVVIAR-----GVVAGLERSLRIMMPLLFVMILVLLGYSMTTGHFMEGVHFM 174

Query: 208 FQPDFSKIWDVKVWAAAYGQIFFTLSIGFAIMLAYSSYLPEKSDITNNAFMTVLINCGFS 267
           F     K+ D  +   A G  FF+LS+G   ++ Y +Y+P+ + +T   F   L++   S
Sbjct: 175 FDFQPEKVLDGLL--PAMGHAFFSLSVGVGSIMIYGAYMPKNASLTRTVFGVALLDTFVS 232

Query: 268 VLAGIMIFSVLGYMAQEQGKPLTEVVSAGVGLAFVTLPAAINLLPIPYILGPLFFLALVV 327
           +LAG+ +F ++               S G GL FV+LP A   +    ++G +FFL + +
Sbjct: 233 LLAGVALFPIVFAAGLNP--------SEGPGLMFVSLPFAFGSMAFGQVMGVVFFLLVAI 284

Query: 328 AGLSSHISIMEAVTSALIDKLGWSR-------------------------KKAANIVIGI 362
           A  SS IS++E + + L+++   SR                         K+A   V   
Sbjct: 285 AAWSSAISLLEPMVAYLVERTLLSRAWVTFWLAFTCWFVGLGTVFSFNIWKQAKFFVNED 344

Query: 363 GFLVSMAFATNGGLLLLDLVDHFANNVGIMASCLVELVLMTWLLKISDVRKYVNSISDFS 422
           G      +   GGL    ++D F + + +    L  +V   W++    VR  ++  S   
Sbjct: 345 GLFHLYQWGATGGLDFFGVIDFFTSRIMLPLGGLCFVVFAGWIMGREAVRDELSLRSPVL 404

Query: 423 VGVWFDICLRFVSPVILAIIVATKL 447
            G+     +R+V+P+ + ++ A +L
Sbjct: 405 FGLSL-FLMRYVAPIGILVVFAAQL 428