Pairwise Alignments

Query, 486 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., Na+-dependent transporters of the SNF family from Pseudomonas stutzeri RCH2

 Score =  214 bits (545), Expect = 5e-60
 Identities = 152/491 (30%), Positives = 248/491 (50%), Gaps = 44/491 (8%)

Query: 6   WGSRVGFVLAAVGSAIGLGNIWRFPYMAYENGGGAFFIPYLFAMVTAGIPFMILEFSMGQ 65
           W SR GF+LAA GSA+GLGNIW+FPY+  E GGGAF + YL  ++  G+P M+ E ++G+
Sbjct: 10  WLSRWGFILAATGSAVGLGNIWKFPYITGEFGGGAFVLMYLLCILAIGVPVMMCEIAIGR 69

Query: 66  KHRGSAPTTLAKI------HSKFEWLGWFQVGIAAVIAVYYVAVIGWAISYFGMSFTQSW 119
           + RGS    + ++      +  ++ +G   +    +I  +YV V GWA +Y       S 
Sbjct: 70  RGRGSPIDAIGRVVRENNGNPLWKAVGGMAMTAGFLILCFYVVVAGWAFAYTVKMLDGSL 129

Query: 120 GSDTNAYFFSEYLKLGDNSPTNLGSIQWHIAFAMLIAWVITYAAIVGGVKKGIERASKIM 179
            + T+        +  +++P  LG   W +  A+L  W+     +  GV+KGIE A + M
Sbjct: 130 AA-TSVEALGGVFEAHNSNPWQLGG--WSLLVALLTLWI-----VAKGVQKGIENAVRWM 181

Query: 180 MPILFIMVLILIARMIFLPGALDGVNYMFQPDFSKIWDVKVWAAAYGQIFFTLSIGFAIM 239
           MP L +++LIL+   +   G   G  ++F  D SKI   +   AA G  FFTLS+    +
Sbjct: 182 MPGLAVLLLILVGYAVTSGGFDQGFAFLFSFDTSKITG-EALLAALGHAFFTLSLASGAI 240

Query: 240 LAYSSYLPEKSDITNNAFMTVLINCGFSVLAGIMIFSVLGYMAQEQGKPLTEVVSAGVGL 299
           L Y SY+P+   I    FM  + +   ++LAG+ IF ++     +         +AG GL
Sbjct: 241 LTYGSYIPDDQSIARTTFMVAIADTCVALLAGLAIFPIIFANGMDP--------TAGPGL 292

Query: 300 AFVTLPAAINLLPIPYILGPLFFLALVVAGLSSHISIMEAVTSALIDKLGWSRKKAA--- 356
            F++LP A   +P     G LFF  + +A L+S IS++EA  + L +K G SR KAA   
Sbjct: 293 IFMSLPLAFQQMPFGTAFGVLFFAMVSIAALTSAISMIEATVAYLNEKHGISRLKAAMGS 352

Query: 357 -NIVIGIGFLVSMAFA-----TNGGLLLLDLVDHFANNVGIMASCLVELVLMTWLLKISD 410
             +++ I  L  ++F      T  G    D +D+  +   +    +  ++L  + L+   
Sbjct: 353 GAVLLVISMLAMLSFNLMSGWTPMGKNFFDWLDYLTSRWMMPLGGIFTVLLAGYALRSEI 412

Query: 411 VRKYVNSISDFSVGVWFDICLRFVSPVILAIIVATKLQALFTEGYGGYDLTLGW----AI 466
           +R  +N +      +W    +R+V PV++ ++    L AL   G+ G+D    W      
Sbjct: 413 MRDELN-LPPLGYALWL-FMVRYVCPVLILMVF---LHAL---GWLGFDPLQRWYWIAGA 464

Query: 467 IAALLVIGILI 477
           I AL ++G L+
Sbjct: 465 IGALTLVGELL 475