Pairwise Alignments

Query, 486 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., sodium-dependent transporter family protein from Marinobacter adhaerens HP15

 Score =  234 bits (596), Expect = 6e-66
 Identities = 158/466 (33%), Positives = 248/466 (53%), Gaps = 47/466 (10%)

Query: 2   KREQWGSRVGFVLAAVGSAIGLGNIWRFPYMAYENGGGAFFIPYLFAMVTAGIPFMILEF 61
           +R  W SR+ F+LAA GSA+GLGNIW+FPY+  ENGGGAF + YL  +   GIP M+ E 
Sbjct: 21  QRGLWSSRLAFILAATGSAVGLGNIWKFPYVTGENGGGAFVLVYLLCIAVVGIPIMMAEV 80

Query: 62  SMGQKHRGSAPTTLAKI--HSKFE--WLGWFQVGIAA--VIAVYYVAVIGWAISYFGMSF 115
            +G++   S   +L+ I  H + +  W     +GI A  +I  +Y  + GWAISY G + 
Sbjct: 81  MIGRRGGRSPVKSLSLIAEHDRLKPAWKLVGAIGILAGFLILSFYSVIGGWAISYVGTTA 140

Query: 116 T---QSWGSDTNAYFFSEYLKLGDNSPTNLGSIQWHIAFAMLIAWVITYAAIVGGVKKGI 172
           +       +DT    FS  L    + PT L  + WH  F  ++  V     +V GV+ G+
Sbjct: 141 SGQLAGQSADTVGAVFSGLL----SDPTKL--LAWHTLFMAMVMVV-----VVRGVRSGL 189

Query: 173 ERASKIMMPILFIMVLILIARMIFLPGALDGVNYMFQPDFSKIWDVKVWAAAYGQIFFTL 232
           ERA  I+MP LF+++LI++   +          ++FQPDFSK+    +   A G  FFTL
Sbjct: 190 ERAVSILMPALFVLLLIVVGYAMTTGHFGQAAAFLFQPDFSKLTTSGI-LVALGHAFFTL 248

Query: 233 SIGFAIMLAYSSYLPEKSDITNNAFMTVLINCGFSVLAGIMIFSVLGYMAQEQGKPLTEV 292
           S+G A+M+AY SYLP+   I   +    +I+ G ++LAG+ IF ++     E G      
Sbjct: 249 SLGMAVMMAYGSYLPKNISIAKTSITVSVIDTGVALLAGLAIFPIVFANGLEPG------ 302

Query: 293 VSAGVGLAFVTLPAAINLLPIPYILGPLFFLALVVAGLSSHISIMEAVTSALIDKLGWSR 352
             AG GL F TLP A   +P+  + G LFF+ L+ A  +S IS++E +   L ++ G +R
Sbjct: 303 --AGPGLIFQTLPLAFGQMPMGSLFGTLFFVLLIFAAWTSGISLLEPIVEWLEERKGMNR 360

Query: 353 KKA---ANIV---IGIGFLVSM----AFATNG------GLLLLDLVDHFANNVGIMASCL 396
             +   A  V   +GI  ++S+     FA  G      G  + DL+D F  N+ +    L
Sbjct: 361 TVSTLGAGFVCWGLGIASILSLNLWSDFAPLGFVPMLEGKTIFDLLDFFTANIMLPLGGL 420

Query: 397 VELVLMTWLLKISDVRKYVNSISDFSVGVWFDICLRFVSPVILAII 442
           +  +   W++    + + + ++S     +W  I +RF++PV +A++
Sbjct: 421 LVALFAGWVMSRQAMEREL-ALSPAMFNLWL-ITVRFITPVAVAVV 464