Pairwise Alignments

Query, 486 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., sodium-dependent transporter, NSS family protein from Marinobacter adhaerens HP15

 Score =  196 bits (497), Expect = 2e-54
 Identities = 126/425 (29%), Positives = 211/425 (49%), Gaps = 35/425 (8%)

Query: 3   REQWGSRVGFVLAAVGSAIGLGNIWRFPYMAYENGGGAFFIPYLFAMVTAGIPFMILEFS 62
           R+QW S   FV +   +A+GLGN+WRFPYM  ENGGGAF + YL A++   +P MILE S
Sbjct: 12  RKQWSSEPAFVASMAAAAVGLGNLWRFPYMVGENGGGAFVVAYLLALIVVVLPIMILEVS 71

Query: 63  MGQKHRGSAPTTLAKIHSKFEWLGWFQVGIAAVIAVYYVAVIGWAISYFGMSFTQSWGSD 122
            G+  +GS   T  +++      GWF V I   I  YY+ + GW + Y   + T +    
Sbjct: 72  AGRLSKGSTVQTYRQVNRFGVVYGWFVVLITVAITSYYLVITGWTLGYAVDAATNN---- 127

Query: 123 TNAYFFSEYLKLGDNSPTNLGSIQWHIAFAMLIAWVITYAAIVGGVKKGIERASKIMMPI 182
                    L++ D+      S+ W+  FA+ +   I  A  V      IE  SKI+MP+
Sbjct: 128 ---------LQVFDDFTAGYNSL-WYF-FAVTVVGAIILAKDV----TAIELLSKILMPV 172

Query: 183 LFIMVLILIARMIFLPGALDGVNYMFQPDFSKIWDVKVWAAAYGQIFFTLSIGFAIMLAY 242
           L ++++ L+       G     ++ FQ D+S++ D K+WA A+GQ F++L+IG   ++ Y
Sbjct: 173 LIVVMIGLVILASRTSGWEQTKDFFFQVDWSRLTDGKLWAFAFGQAFYSLAIGQGYLVTY 232

Query: 243 SSYLPEKSDITNNAFMTVLINCGFSVLAGIMIFSVLGYMAQEQGKPLTEVVSAGVGLAFV 302
            S++P ++ +     +        ++LAG MIF  +  +  E         + G  LAFV
Sbjct: 233 GSFIPRQTHVPRACLIVAGTETSVALLAGWMIFPFVFSLGMEP--------TEGSQLAFV 284

Query: 303 TLPAAINLLPIPYILGPLFFLALVVAGLSSHISIMEAVTSALIDKLGWSRKKAANIVIGI 362
           T+P     +   Y +G LFF    +A  SS ++ ++ + +A+ ++   S  KA ++V  +
Sbjct: 285 TMPRVFEDMAGGYWVGTLFFSLFFMAAFSSSLAGLKVMIAAVAEEFRLSNGKAVSLVTLM 344

Query: 363 GFLVSMAFATN--------GGLLLLDLVDHFANNVGIMASCLVELVLMTWLLKISDVRKY 414
             ++  A A +         G  +LD++D  A    I+ S ++   L  W +    +R  
Sbjct: 345 MLVLGTASALSFTPLEWNIAGEPVLDVIDRVAGGNVIIFSGVLGAALFCWFIPPEKIRTV 404

Query: 415 VNSIS 419
           + + S
Sbjct: 405 LGTQS 409