Pairwise Alignments

Query, 486 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., sodium-dependent symporter family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  208 bits (530), Expect = 3e-58
 Identities = 140/463 (30%), Positives = 235/463 (50%), Gaps = 36/463 (7%)

Query: 3   REQWGSRVGFVLAAVGSAIGLGNIWRFPYMAYENGGGAFFIPYLFAMVTAGIPFMILEFS 62
           R+ + +R+G + A +GSA+GLGNIW+FP +  +NGG  F + Y+ A +  G+P MI E  
Sbjct: 8   RDGFATRLGVLAATLGSAVGLGNIWKFPALTGQNGGATFLLVYIIATLLVGLPVMISEIM 67

Query: 63  MGQKHRGSAPTTLAKIHSKFEWLGWFQVGIAAVIAV-----YYVAVIGWAISYFGMSFTQ 117
           +G+K + +A  T  ++  K +   W  +GI+ VIA      +Y  V GW  +Y   + + 
Sbjct: 68  LGRKAKANAVRTYRELGPKGQ--PWSLIGISGVIAAVLIMGFYTDVAGWVFAYIFKAMSG 125

Query: 118 SWGSDTNAYFFSEYLKLGDNSPTNLGSIQWHIAFAMLIAWVITYAAIVGGVKKGIERASK 177
           S  +   A     ++ L   SPT     QW       I   +  A I+GGV  GIER +K
Sbjct: 126 SIATTDPAVAKEAFVAL-VGSPTQSLMWQW-------IVLALVSAIILGGVSSGIERTTK 177

Query: 178 IMMPILFIMVLILIARMIFLPGALDGVNYMFQPDFSKIWDVKVWAAAYGQIFFTLSIGFA 237
           I+MP+L +++ ++ AR + LP A +G+ ++F PDFSKI    V   A G  FF LSIG  
Sbjct: 178 ILMPVLLLLLCVVCARSLTLPKAAEGLAFLFTPDFSKITG-GVILMALGLAFFKLSIGMG 236

Query: 238 IMLAYSSYLPEKSDITNNAFMTVLINCGFSVLAGIMIFSVLGYMAQEQGKPLTEVVSAGV 297
            M  Y SY  +  +I   A   +L +   S+LAG+ IF  +     E         SAG 
Sbjct: 237 TMTTYGSYFRDDQNIPVTAARVMLCDLSISILAGVAIFPAVFNFGFEP--------SAGP 288

Query: 298 GLAFVTLPAAINLLPIPYILGPLFFLALVVAGLSSHISIMEAVTSALIDKLGWSRKKA-- 355
            L F+T+PA    +P   +   +FF    +A   + +S+ E   + L+++   SR KA  
Sbjct: 289 SLLFMTIPAVFASMPGGQLFTVIFFCLTAIAATGAMLSLFEVPVAWLVEEFKMSRAKATI 348

Query: 356 -ANIVIGI-GFLVSMAFATNG-----GLLLLDLVDHFANNVGIMASCLVELVLMTWLLKI 408
              +V+G+ G   +++ +  G     GL + DL D  ++N+ +    +   +   W+   
Sbjct: 349 GTALVLGVMGAPATLSMSVLGDFKMFGLNMFDLYDFVSSNILLPVGGIFICIFAGWVWGS 408

Query: 409 SDVRKYVNS---ISDFSVGVWFDICLRFVSPVILAIIVATKLQ 448
              R+ +++   + + +V   F   +++VSPV++ I++   L+
Sbjct: 409 KRTRELLSNGGHLDNAAVVSGFLFVVKWVSPVLVTIVLLNGLK 451