Pairwise Alignments

Query, 196 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.3 bits (142), Expect = 5e-14
 Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 29/214 (13%)

Query: 6   LFILNTLFLLFAPLSA---AEWMVTPSVGYTLGGKVLDQAGRQYDLENSSSY---ALAIE 59
           LF + +L  L   L A    E  V P  GY+ GG   D    Q D EN+ +    ++ IE
Sbjct: 30  LFAIASLLPLCLVLPAHADPELFVAPFGGYSFGGSSFDI--NQVDAENAETVNKQSVGIE 87

Query: 60  T-----------TYDNGRIGLFYSTEPTEVQT--LVNQDA----SIHYLHFQSSIYYPVA 102
                       T D G I L YS + +E+++  L   D      + Y+H   ++++P  
Sbjct: 88  EASHLGLMLGIGTNDPGNIYLLYSRQSSELKSGGLFTPDLVASLDVDYIHLGGTLFFPYG 147

Query: 103 EKLSSFIGLGIGGAYTDVAWADKKFGFSASAFGGVEYRIASNVALNAQLRWLGTMVDNDS 162
           +    +I    G           +  FS    GGVEYR+  + ++ A LR   T +D+D+
Sbjct: 148 D-FQPYITASAGVTRMMPDDWSTETRFSMGIGGGVEYRMMQHFSVFADLRGYATFIDSDT 206

Query: 163 SAICTLPSSESCVVKFKSDWLNQATAYVGFTIRF 196
           S  C   +   C+ +  SD + Q  A VG    F
Sbjct: 207 SLFC---NETECLWRVTSDVMWQVQANVGIKFSF 237