Pairwise Alignments

Query, 389 a.a., patatin family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., patatin (RefSeq) from Shewanella loihica PV-4

 Score =  127 bits (319), Expect = 5e-34
 Identities = 74/200 (37%), Positives = 117/200 (58%), Gaps = 2/200 (1%)

Query: 32  ALVAQGGGQRGIFTAGVLDAFLLSNFDPYHEFYGTSAGALNLCAFLSRQTGLSKAFILEL 91
           AL+A+GGGQRGIFTAGVLDA+L   ++P+    GTSAGA NL ++L+ Q G +K  I  L
Sbjct: 60  ALIAEGGGQRGIFTAGVLDAWLERGYNPFALLIGTSAGAQNLSSYLTGQIGFAKQAIKGL 119

Query: 92  TTRAEFFHLFSYIRRKQYMNMQWALDRIGEYPYRLDLDMARQALGKRKAYAAVTSADDLK 151
           +   +F  +   +  K  +++ W  +++      LDL    +AL  R+   ++T+  + +
Sbjct: 120 SRDPQFVKVSRGLAGKSTVDLDWYFNQVQGESLGLDLSAGMRALRHRQLLFSMTNGSNYQ 179

Query: 152 DAYFPMLGADWQQVLLATCAIPGLYPEPVTLAGKQYIDGGVSASIPVQEAWRKEARFITV 211
             +      +W ++L A+ A+P LY + V L    Y+DGG+SA +PV+EA+R+ A  I V
Sbjct: 180 AIFRQPDKQNWLELLKASSALPFLYRQGVPLEDSFYVDGGLSAPLPVEEAYRRGATKIVV 239

Query: 212 IRTEFMSKEEETPSPSATEL 231
           IRT  M +E +  +P    L
Sbjct: 240 IRT--MPEEYQAYTPWVNRL 257



 Score = 38.5 bits (88), Expect = 3e-07
 Identities = 22/58 (37%), Positives = 28/58 (48%)

Query: 315 HYQTYTLTSEFLDAHHDDTFIAQIMPSEPLHSNSLLSSPEALQYDYELGLKAGYRFLK 372
           H   Y  +  F+D   +   I Q+ P   L S  L SS   L  DY LG  AG++FLK
Sbjct: 277 HEAEYKRSLSFIDNPPEGVEIIQLFPRRALASKLLGSSTAELDRDYRLGRLAGFKFLK 334